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improve alignment track sequence qual... was committed by Robert Buels
Wednesday Oct 17

Commit [f13c3de2c36b38bcf488c5d9a871812f70b007a8]
colorize bases in the sequence track,... was committed by Robert Buels 07:39 AM
Commit [9d72cdd8bb6c2c581632ec56458fd2067c142365]
Renamed stuff https://github.com/GMOD... was committed by Erik Derohanian 07:37 AM
Commit [dc9551d56722e0e0e660a30920fe76d7c64cccb0]
tweak alignment default colors https:... was committed by Robert Buels
Tuesday Oct 16

Commit [20ae36ff83b5c3848b22a6afb9ac786f4dec5815]
add a display of sequence quality sco... was committed by Robert Buels 03:29 PM
Commit [7b593fd3f48a11191a0f3efdbac98247eff63479]
improve styles of default track metad... was committed by Robert Buels 01:50 PM
Commit [344acf070c88067537fdb69acf33bc1b5743fa28]
add an Alignments track type, which c... was committed by Robert Buels 01:12 PM
Commit [a5933388b750eeb92e4a483892031282d6795ea7]
Now loads functions properly referen... was committed by Erik Derohanian 12:36 PM
Commit [149b3625a079c0247616e06c32c40a8c4d96feb7]
make it possible to style the individ... was committed by Robert Buels 09:51 AM
Commit [7696c2da3d57940306ffbe838f72b54b8a15e991]
Merge branch 'maint/1.6.x' Conflicts... was committed by Robert Buels 09:19 AM
Commit [d5712a46a32cd5b0dcbb554eb46ba5b334b3726c]
release 1.6.4 https://github.com/GMOD... was committed by Robert Buels 08:53 AM
Commit [f6a0698517aca22c8bc76bb5bd2836c28258bf7a]
tweak release notes wording https://g... was committed by Robert Buels 08:49 AM
Commit [e4fb8bbd8297ecf2f962e86d7af70ba2887e167d]
update release notes for lazypatricia... was committed by Robert Buels 08:25 AM
Commit [d8e1cace2eecf8e1cab742d9a56e4cc6e6716bf8]
improve LazyPatricia partitioning cri... was committed by Robert Buels 08:25 AM
Commit [d7180a5734bc6eacacbce6bcc4081906f8c74291]
Works, I think? https://github.com/GM... was committed by Erik Derohanian
Monday Oct 15

Commit [aa17ecbb09c0d855433769a3c7751ad3bcd6b5c9]
Merge branch 'master' of https://gith... was committed by Erik Derohanian 11:59 AM
Commit [71928a2441d81c3cb29e78ec42fc1b64eacc078c]
switched API for ConfigAdaptor/gbrows... was committed by Erik Derohanian 11:14 AM
Commit [78937f71a8c036edb79774442bbd74e69f37d5cf]
unnecessary code https://github.com/G... was committed by Robert Buels
Friday Oct 12

Commit [fc02fc66ead913339dd01070feddf87d053a3284]
don't rename segment to seq_id in BAM... was committed by Robert Buels 01:41 PM
Commit [c9e54ec627e7e5bafb024a382c4906ec45653ded]
remove the Strand field in the defaul... was committed by Robert Buels 01:39 PM
Commit [21de408519e1189078b6b1abe6c3345b901cd84b]
in gff3 export, add a leading undersc... was committed by Robert Buels 01:32 PM
Commit [5a8304444c00ade96a8538bb03ac8618afef64aa]
parse BAM CIGAR strings into GFF3-com... was committed by Robert Buels 01:31 PM
Commit [bb02300e6b4cb6a7ed728ba695d004e86d3e4a46]
bugfix to by enbugging of default fea... was committed by Robert Buels 01:08 PM
Commit [74a6b27dc3166d6b2334f55c57a28588ac08cb9b]
make feature default detail dialog mo... was committed by Robert Buels 12:46 PM
Commit [07a70982ff366478cc4f111775b9f9ed451654de]
fix BAM quality value parsing https:/... was committed by Robert Buels 12:42 PM
Commit [01af0342f647e48df8de80dc0b6ea8eec96967d4]
further tweak the field names of BAM ... was committed by Robert Buels 12:22 PM
Commit [c086d0c2b23cd35992e1a96c07e44a2d8e8c4c8f]
try to deal more correctly with unmap... was committed by Robert Buels 12:04 PM
Commit [a15943f2a2876b5c359a5f73da3780db0dec085d]
add complete decoding of BAM multi-se... was committed by Robert Buels 11:38 AM
Commit [b11cda16d7b5086221ad7de7aed3c5cfc3f4f43e]
fix BAM backend reverse-complemented ... was committed by Robert Buels 11:28 AM
Commit [f3dec4494d2cae82eeff3715eed535e28d0ac95c]
rename the `revcom` BAM record field ... was committed by Robert Buels 11:21 AM
Commit [4d6dc7d62022d92d91a9a01f09983965acb9a975]
make default feature detail dialog ab... was committed by Robert Buels 11:20 AM
Commit [6e11a2e8670e3d37a0a1e80f3269071c2ce49b5e]
fix GFF3 output of boolean feature at... was committed by Robert Buels 11:13 AM
Commit [5894bd5da887067f4a7c0140513ba2f6b3b82497]
make the BAM backend also decode the ... was committed by Robert Buels 11:13 AM
Commit [d850916390976acd32eae4460a2692ce36853cab]
stop trying to cache tagnames for BAM... was committed by Robert Buels 11:13 AM
Commit [91a80f47118cde698a9b22ac62c27d75c1f99110]
don't add sam_ to the beginnings of t... was committed by Robert Buels 10:14 AM
Commit [f44f9ecbd923679cdae5591c06cc0a4888a3daa3]
in HTML feature tracks, get rid of th... was committed by Robert Buels 08:15 AM
Commit [37d6f6b182df2ae2d136a308b1e3cb1b57e1e592]
make XHRBlob cache global, providing ... was committed by Robert Buels
Thursday Oct 11

Commit [698560bdf8aefff6cb7e6dd4ec3cf96c1967b508]
make HTMLFeatures tracks act sensibly... was committed by Robert Buels 12:11 PM
Commit [cb97889fc1b4bb0fdb2b6f6bb35e6c1acde68d00]
increase the size of hte BAM cache to... was committed by Robert Buels 11:39 AM
Commit [8c851c574b385273475316533b6c6ce3d8c402c2]
more LRUCache bugfixes. getting clos... was committed by Robert Buels 11:21 AM
Commit [5c050ece80aa6f134fda975a3fd3ecb6c4d8dc92]
multiline subsection test https://git... was committed by Erik Derohanian 11:00 AM
Commit [6bf7183cb6fe5a19682af140e207c0d5a66fe95c]
further improve LRUCache logging http... was committed by Robert Buels 10:00 AM
Commit [1dd21fb815252d4604fe8bd3539caf35a1369164]
add caching of BAM records https://gi... was committed by Robert Buels 09:46 AM
Commit [8e3e4340c73ad33283854e4558c059c9efa7b37a]
refinements to LRUCache logging, can ... was committed by Robert Buels 09:46 AM
Commit [252bb06ff5ec4444a747b762f3d74ba26015bd8d]
refactor BAM/File.js in preparation f... was committed by Robert Buels 09:35 AM
Commit [8001a93f11e0e35b0bcc18186917ab4902cee746]
Comments, whitespace, small changes h... was committed by Erik Derohanian 09:04 AM
Commit [a4aaecfeb153665b820ead643c60422422190d22]
Added support for [section/subsection... was committed by Erik Derohanian 08:21 AM
Commit [d667f5d69bbd3aa0eb320a1b0847886a98aa9b80]
add a "Press CTRL-C" message in the s... was committed by Robert Buels 08:15 AM
Commit [02eed8a433b9aefed6eacf3b9308d77dedae36eb]
LRU cache refinements, including cons... was committed by Robert Buels 07:17 AM
Commit [a21d47e8690b9b90d1cdeb5420e3b2384cdde564]
add LRU caching to XHRBlobs, providin... was committed by Robert Buels
Wednesday Oct 10

Commit [a8aaf7f7c0feb91fc1bf3ed2f3613af691392d9f]
WIP on putting a caching backend on X... was committed by Robert Buels 02:59 PM
Commit [09bc39c2e05e9c1bf0cbce8d8245e5ce77aab5e8]
filter BAM records coming from the fi... was committed by Robert Buels 01:57 PM
Commit [e0a0bf9803fe6931f214bb70e5e2a66f33cb6667]
estimate the feature density in a BAM... was committed by Robert Buels 01:57 PM
Commit [e72351b664bcc79d4d135da1aa4e2376219de245]
mostly whitespace, etc https://github... was committed by Erik Derohanian 12:43 PM
Commit [d29d50e6e31624e38a9e42b14c03a3625af9e390]
do svn export instead of checkout of ... was committed by Robert Buels 12:20 PM
Commit [94fc664a14948df16f4e9a137f07565d55b4ac5c]
More cleanup https://github.com/GMOD/... was committed by Erik Derohanian 12:17 PM
Commit [9c4b4b8d733f9ecc8807d914847054d731df1b73]
More cleanup https://github.com/GMOD/... was committed by Erik Derohanian 12:02 PM
Commit [2c9867868b08f1dd3de31c1bd2b56fc2c42533a0]
Merge branch 'master' into issue94_ba... was committed by Robert Buels 11:55 AM
Commit [51b707fd7467293f9a94b4df964e290363c5cc70]
greatly speed up HTML subfeature rend... was committed by Robert Buels 11:54 AM
Commit [a65adbd3d0c52a708b7f2906849a8bd133a35b5b]
Rearranged code into pseudo-state mac... was committed by Erik Derohanian 11:11 AM
Commit [4da1a54e26e68dcf9dba6d77e5e19144475541a8]

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