Tickets - JBrowse - jbrowse

	#	State	Title	Milestone	Assigned to	Age ↓
	13	✓resolved	~~handle features without strand information better~~	none	Mitch	about 10 years old
	86	new	Right way to remove a reference sequence?	none	Mitch	over 12 years old
	66	✓resolved	~~Documentation of FeatureTrack JSON format~~	none	Ian Holmes	over 12 years old
	4	✓resolved	~~lazy load features~~	none	Mitch	over 12 years old
	67	✓resolved	~~config file: limit features by source; set feature label~~	none	Mitch	almost 13 years old
	60	✓resolved	~~gridline spacing should be controllable from client (or they can be hidden)~~	none	Mitch	almost 13 years old
	3	✓resolved	~~generate chunked sequence~~	alpha 0.5	Mitch	almost 13 years old
	62	✓resolved	~~support the bioperl multiple-location mechanism~~	none	Mitch	almost 13 years old
	24	✓resolved	~~End user documentation~~	none	Mitch	about 13 years old
	30	✓resolved	~~Screencast~~	none	Mitch	about 13 years old
	84	✓resolved	~~Different colors for track LABELS~~	none	--	about 13 years old
	58	✓resolved	~~feature density/histogram should not be bigger than visible display~~	none	Mitch	about 13 years old
	41	✓resolved	~~UI to set y-axis scale~~	none	Mitch	about 13 years old
	37	✓resolved	~~"virtual tracks" as a mechanism for initiating analyses~~	none	Mitch	about 13 years old
	75	✓resolved	~~Error in JsonGenerator.pm: division by zero~~	none	JBrowse	about 13 years old
	42	✓resolved	~~Dragging Zoom~~	none	JBrowse	about 13 years old
	20	✓resolved	~~Allow users to set feature density thresholds~~	none	Mitch	about 13 years old
	74	✓resolved	~~Problem with dataRoot property in mixed environments (tomcat/apache)~~	none	--	about 13 years old
	73	✓resolved	~~LoadHelper.pm DESTROY error~~	none	--	about 13 years old
	85	new	bam_to_json.pl show alignments as alignments, not single spans	none	JBrowse	over 13 years old
	83	new	Make browser usable for large next-generation assemblies.	none	--	over 13 years old
	51	new	Circular Genome Support	none	Mitch	over 13 years old
	82	new	DNA track not shown when zoomed using location text box	none	--	almost 14 years old
	81	new	page reload on empty display area causes default track to display	none	--	almost 14 years old
	80	new	Allow user to specify label/mouseover	none	--	about 14 years old
	79	new	When zooming at sequence level, navigating to another chromosome fetches all the files from the current one	none	--	about 14 years old
	77	new	Missed optimization gcc option in wig2png makefile	none	--	about 14 years old
	76	new	wig-to-json.pl generates blank tiles	none	JBrowse	about 14 years old
	78	new	Error in flatfile-to-json with bed file	none	JBrowse	about 14 years old
	72	new	Convert to gff	none	--	over 14 years old

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