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Mitch

Mitch

Member of 1 project: JBrowse

Mitch's latest activity

Wednesday, October 13 2010
70 include reverse complement in DNA track was updated in JBrowse
  • Mitch
    Mitch commented at 12:15 PM

    potentially with toggle-able option
  • Mitch
    Mitch created the ticket at 12:15 PM
69 allow users to specify the list of refs to prepare-refseqs.pl in a file was created in JBrowse
  • Mitch
    Mitch created the ticket at 11:54 AM
Sunday, October 03 2010
31 write an adaptor allowing Bio::Graphics to produce image tracks was updated in JBrowse
  • Mitch
    • State changed from new to resolved
    • Milestone order changed from 0 to 0
    by Mitch at 2:25 PM

    I believe this ticket is resolved by Ian's ImageTrackRenderer.
58 feature density/histogram should not be bigger than visible display was updated in JBrowse
  • Mitch
    • State changed from new to resolved
    • Milestone order changed from 0 to 0
    by Mitch at 2:22 PM

    In release 1.1, the client has global knowledge about the range of values in the histograms, and uses that information to set the scale of the histogram so that...
18 move stripe-management logic out of GenomeView was updated in JBrowse
12 deal with percentage inaccuracy was updated in JBrowse
9 showVisibleBlocks doesn't always show all visible blocks was updated in JBrowse
  • Mitch
    • State changed from new to resolved
    • Milestone order changed from 0 to 0
    by Mitch at 1:13 PM

    fixed at some point before release 1.1
4 lazy load features was updated in JBrowse
  • Mitch
    • State changed from new to resolved
    • Milestone order changed from 0 to 0
    by Mitch at 1:12 PM

    fixed in release 1.1
67 config file: limit features by source; set feature label was updated in JBrowse
  • Mitch
    • State changed from new to resolved
    by Mitch at 1:10 PM

    You can create a custom feature label with the "label" setting in the config file. It should be a perl sub; it gets the bioperl object as its first argument, an...