Changesets - JBrowse - jbrowse

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[update docs] link to older jbrowse f... was committed by Colin
Thursday Nov 08

Commit [a5fdcee48d418eee55650d6e12ffb3fd1f3e0d6c]
Update release-notes.md https://githu... was committed by Colin 05:43 AM
Commit [e3316e87a685471a668e362bcf73df59fa369d78]
Don't use tenacious fetch on local fi... was committed by Colin 05:40 AM
Commit [d9c1a002137ada97816eae95330d1bfd8d3bcec9]
Simpler buffer to string https://gith... was committed by Colin 05:40 AM
Commit [a4449bcf988de9a407aba92d98dec49851b513a3]
Add ChromSizes parser https://github.... was committed by Colin 05:40 AM
Commit [b5745336d16d3dddd466044ddce3678c52a8899c]
Don't use tenacious fetch on local fi... was committed by Colin 05:40 AM
Commit [4604c86b98fd8fc87b9d4dbd49402aeec94905ab]
Don't use tenacious fetch on local fi... was committed by Colin 05:37 AM
Commit [4d6192ad9ec444c96717358542955130a665fd05]
Upgrade docusaurus https://github.com... was committed by Colin 05:27 AM
Commit [073d2fbbe15f63413ba37680394704e2d89e6d7a]
Simpler buffer to string https://gith... was committed by Colin 04:56 AM
Commit [f3f7902f0fb52f4972b0e788e618762a67bd799a]
Simpler buffer to string https://gith... was committed by Colin 04:52 AM
Commit [55680da75408f47d7aa199086e62adf288092882]
Fix for occasional failure parsing ge... was committed by Garrett Stevens
Wednesday Nov 07

Commit [1506b774a0d6707c0d5992e8a046587ccde8b97d]
Fix for regularizing names of X, Y, a... was committed by Garrett Stevens 12:48 PM
Commit [eea6ac716fd806941c1012ac7163c018c2d33ce5]
Make insert size coloring part of pai... was committed by Colin 11:52 AM
Commit [2af70eb8c3ecbc6c8c0a13df45f5c228ab940b0f]
Add unified pair cache across bam/cra... was committed by Colin 10:57 AM
Commit [f6001d1c6a220aa2288ce24d0b856716e7678b91]
Bump gmod/vcf version https://github.... was committed by Garrett Stevens 10:39 AM
Commit [e2f4fa789f18bb59a42b37f797f738d30beb69a5]
Add ChromSizes parser https://github.... was committed by Colin 10:18 AM
Commit [fb73d64f1f6a8cfefa6278b2a32073fb15f8c9a3]
Add external pair cache https://githu... was committed by Colin 10:14 AM
Commit [4862c50fe013034183a5f26ea73c16d64c240cda]
Add ChromSizes parser https://github.... was committed by Colin 06:44 AM
Commit [91571e5d9bd086d41887ea1762023ef551f18de9]
Add ChromSizes parser https://github.... was committed by Colin 06:43 AM
Commit [24059c3b5c74994f1a44b9cdfbf5c79bc54edd73]
Update flatfile-to-json tests for tri... was committed by Colin
Tuesday Nov 06

Commit [e56619cbc12787934dbd0cbf02f6b61707546684]
Update flatfile-to-json tests for tri... was committed by Colin 02:26 PM
Commit [62bf4f89daf958d7ac351c025815a34a05765df0]
Update flatfile-to-json tests for tri... was committed by Colin 02:24 PM
Commit [cdc5d764757d314696c372be347af5704a22f164]
Update flatfile-to-json tests for tri... was committed by Colin 02:22 PM
Commit [454c0cd8bc6894371dcdc98e20470c623523d132]
Add mapping of whitespace trim to val... was committed by Colin 01:29 PM
Commit [ee007fb811e45f9d787d4d18545d6c838a1b2891]
Trim whitespace on hash keys https://... was committed by Colin 01:17 PM
Commit [f7178e28daf89de334fee937733b4c3ddea926f9]
Use a div instead of a content-pane f... was committed by Colin 12:42 PM
Commit [ea3e12ec54adbe31c66a95596c95b407ceed55cf]
Use a div instead of a content-pane f... was committed by Colin 12:31 PM
Commit [d492bbeb91c847c2483cd737efcbfa67737e4bd7]
Use a div instead of a content-pane f... was committed by Colin 12:25 PM
Commit [ba9ad2090b245db9483a3930e592eaa3ba4737e8]
Use templateSize if templateLength un... was committed by Colin 11:27 AM
Commit [7b8cb404ae6f3d2586e179d3ddb9a3df996528ea]
Override layout when paired arcs are ... was committed by Colin 11:27 AM
Commit [8a82029c69d5d3f1cbf61485dc1f99710adfc1e9]
Add template length https://github.co... was committed by Colin 11:27 AM
Commit [faa90e4be9798f6ced41dce64730d80189d35043]
Refine CRAM pairing code https://gith... was committed by Colin 11:27 AM
Commit [29f8d8020a50ed03f1ececd16c5fb09adf575934]
Cleanup setup.sh https://github.com/G... was committed by Colin 11:27 AM
Commit [9d185fa4bfe660c2951cb59ec3930a40cc0b2d0a]
Add pairing to CRAM https://github.co... was committed by Colin 11:27 AM
Commit [8be002351279325d549298613c61cdfc4e614f87]
Add cram for sv https://github.com/GM... was committed by Colin 11:27 AM
Commit [89cfb805c95b4bbd72c8e52f1f7fd52c37dbaabf]
Override fillFeatures instead of fill... was committed by Colin 11:27 AM
Commit [1d22e28a9f64320a7ed7f2d7a7a8ff1f2c2e243f]
Add colorByAlignments to volvox sv ex... was committed by Colin 11:27 AM
Commit [b80325a084e90ba45b194701c93e3c406cf61a3f]
Move away from visibleRegion dependen... was committed by Colin 11:27 AM
Commit [840c362c0bc99687ba264407a0acd5bd408ce80e]
Add some docs for paired read options... was committed by Colin 11:27 AM
Commit [01f1f12ba5f4e0c4955eaddb0a0798334a9248ee]
Make color by orientation false by de... was committed by Colin 11:27 AM
Commit [0f6f847e7f58024c16649d798b0332c317d75a88]
Update @gmod/bam in yarn.lock https:/... was committed by Colin 11:27 AM
Commit [19b6f283bb7e57fc6212414758bc5855f5ee835f]
Add check for read count for paired s... was committed by Colin 11:25 AM
Commit [a9583458a6bd0025f38c24134cb60c16ea8f6088]
Calculate insert size stats and color... was committed by Colin 11:25 AM
Commit [d1b52a97174ef27c22acb83c84a43f9e6942e3b5]
Cleanup of adapter code https://githu... was committed by Colin 11:25 AM
Commit [9aec5e9a501c419561fd225d72f0addefe08acbe]
RadioMenuItem is too confusing https:... was committed by Colin 11:25 AM
Commit [ff8632ef6582bf79634213c5f23e1996f618ba3c]
Add inversions to our simulated volvo... was committed by Colin 11:25 AM
Commit [0b0ba00a6f4177eb557fde24186d5c6d38c5e823]
Add function for pair orientation htt... was committed by Colin 11:25 AM
Commit [44539076244883c5e5ca2bfe4571d77440d6a458]
Add paired end read sv https://github... was committed by Colin 11:25 AM
Commit [b73df37c6b25d943a98d19f9eef5b4f5879a8f9e]
Use log scale by default https://gith... was committed by Colin 11:25 AM
Commit [5ccf1ec6260e29dcc561b69abf8bf54dd538b556]
Begin paired orientation grabber http... was committed by Colin 11:25 AM
Commit [d381bc54374616299e34d707f7347a7236100fe5]
Add a delay that was detected as need... was committed by Colin 11:25 AM
Commit [7e0a9e26d84406e71fa33a6514ad98fe5cbd46e7]
No need for fetchMap https://github.c... was committed by Colin 11:25 AM
Commit [dccf5700426e41770cf1e29f9e84e233b5e7434f]
Add check for paired reads that ensur... was committed by Colin 11:25 AM
Commit [3de668190a8e35cce73bd1fb2886681360fd5194]
Disable strand arrows at certain scal... was committed by Colin 11:25 AM
Commit [78baa34884ab723bdcc3b260cdda7888599419c6]
Support older api for drawMismatches ... was committed by Colin 11:25 AM
Commit [ff0cda7548bdc56d568f26ef1ccb8c672547ff1b]
Use consistent read1 and read2 on the... was committed by Colin 11:25 AM
Commit [b77db649284162111c4a7de88088c872ece60d80]
Add feature argument for drawMismatch... was committed by Colin 11:25 AM
Commit [e65a2ff2f02a3a27d2d79e257d52040616533419]
Add private non-lowercasing-getter ht... was committed by Colin 11:25 AM
Commit [2c5b0bf2dd40980babf5a6045a7d6c75aab1e2a9]
Use triple equals on attributes https... was committed by Colin 11:25 AM
Commit [025f764b6cb9c57733f2c3a70ca7a8b3f3e22745]
Maintain heights across switches in c... was committed by Colin 11:25 AM
Commit [e22ae24514691ae3d1c77cd2f3ffd8dda9337079]

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