Overview - JBrowse - jbrowse

Populate operation buffer with some l... was committed by Colin
Tuesday Dec 11

Commit [c70a95a6a23ed5c887e631a416316dc9a1226461]
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Add parsing of FAI file for refSeqs i... was committed by Colin 09:34 AM
Commit [604b16e57230f36cbba7ee2ff57242727e860339]
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Add parsing of FAI file for refSeqs i... was committed by Colin 09:32 AM
Commit [03bd658b63f0d878cdc007fcd96e0ef6551c267a]
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Only draw overlapping SNPs at certain... was committed by Colin
Monday Dec 10

Commit [97a4f93d22a7030524d4bdbcaebedf333df7503b]
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The indirection between the BamSlight... was committed by Colin 10:51 AM
Commit [c85375c0c0062ed609a55014650d62ce81449bfe]
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Manually call id method https://githu... was committed by Colin
Sunday Dec 09

Commit [2cbd1c37c857e031e4cc3b0e057ebc211ca5f0c8]
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Add small test file for paired_rnaseq... was committed by Colin 05:57 PM
Commit [f89fafaabe88b25f494457bbf7abee4e4bcdadd9]
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Fix useReverseTemplate option https:/... was committed by Colin 05:44 PM
Commit [57509789f4cd04e99b147493f8c52a28fea87f29]
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Update release-notes.md https://githu... was committed by Colin 11:35 AM
Commit [fff1c4d43e544edba42da1a7bc6895ccf9e73171]
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Add test for CRAM renaming https://gi... was committed by Colin 11:35 AM
Commit [23f2c0a608d3d05f0d4a08a7ddb50fb2f87f3283]
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Fix regularizing reference names on C... was committed by Colin 11:35 AM
Commit [02fcaaf9ddc5100d6d37fdae7aa29636a3716138]
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Update release-notes.md https://githu... was committed by Colin 11:19 AM
Commit [409cce9e3532832f1554bd8544c0eb399f4d4d0f]
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Add test for CRAM renaming https://gi... was committed by Colin 11:15 AM
Commit [7b363bb48e0c9191ac341ef747a8e20d492817f8]
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Fix regularizing reference names on C... was committed by Colin 11:05 AM
Commit [217fce2055912aa8a024710cd940301e781fa844]
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Update release-notes.md [skip ci] htt... was committed by Colin 10:43 AM
Commit [5c28083aa5c8cebb42fcf2898321efa279718336]
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Update release-notes.md [skip ci] htt... was committed by Colin 10:23 AM
Commit [c7468c9bcbce032f1bea9848745d30a5ea3bb063]
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Update release-notes.md [skip ci] htt... was committed by Colin 10:05 AM
Commit [8140f1a2ef75152ff21036bd35991a5f240dca17]
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If _samHeader.refSeqNameToId exists, ... was committed by Colin 09:38 AM
Commit [0cdaa7349e56b5c278fe15edc19494bd75ec1a6c]
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Only render arcs if paired https://gi... was committed by Colin 09:28 AM
Commit [86dccc644b6aa40429b6126cf97283f9eab2c372]
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If _samHeader.refSeqNameToId exists, ... was committed by Colin 08:50 AM
Commit [5da504047fcf94abc655632b6d22bb4f8a8d12d4]
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Add quick view mate buttons back http... was committed by Colin
Friday Dec 07

Commit [8450f6326d8acbebb599ba883ae0d9296a7f6693]
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Update docs for paired read alignment... was committed by Colin 02:29 PM
Commit [5fc442043d0240016a68c43c41651c7bc5324db7]
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Update docs for paired read alignment... was committed by Colin 02:26 PM
Commit [dda2cb317d0f749d8a020858a78ea315da7273f6]
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Update docs for paired read alignment... was committed by Colin 02:24 PM
Commit [658332820ac4cc64a51013b60b71973c1b895044]
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Update docs for paired read alignment... was committed by Colin 02:23 PM
Commit [35253a44cc4886991385a10b1cabf8ff6e37a357]
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Update docs https://github.com/GMOD/j... was committed by Colin 02:14 PM
Commit [c1f01a53267f692badbfe816f952a0b4a5c31abb]
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Update docs https://github.com/GMOD/j... was committed by Colin 02:11 PM
Commit [7ddad9f5576d31202398b109e2a81e15ff980442]
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Update docs https://github.com/GMOD/j... was committed by Colin 02:06 PM
Commit [db2145b8804cd05e205f975286feac0b16fb76a8]
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Add docs for insert size stats https:... was committed by Colin 01:48 PM
Commit [d294b1afd6299bb0e982abd5bfc613da999540ac]
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Add button to re-estimate insert size... was committed by Colin 01:41 PM
Commit [ddcf41468fef2e1936638d12a9337fdb77e86cfc]
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Add back CramSizeLimitError https://g... was committed by Colin 01:20 PM
Commit [cb4fe5b8228c6df3d0940e2b3966ac82ca321099]
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Pngcrush https://github.com/GMOD/jbro... was committed by Colin 01:17 PM
Commit [fa111831bc29d45f6d72581ae2a976a730b735d7]
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Pngcrush https://github.com/GMOD/jbro... was committed by Colin 01:15 PM
Commit [87d10765278ca4567ae1b45064c4214eb78ee210]
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Remove strand inlay https://github.co... was committed by Colin 01:08 PM
Commit [1b0edf6c62444609884c090b4fcc25609ef5fa19]
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Add screenshot for overlapping https:... was committed by Colin 10:29 AM
Commit [f5eea30c85fddd348d64db155147d52a9a7f7c2d]
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Add screenshot for overlapping https:... was committed by Colin 10:11 AM
Commit [cc2b8d1ac8af0dd7836e2255f77b899a5aeb6342]
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Fix off by one in overlapping read pa... was committed by Colin 09:36 AM
Commit [04cc8913164420d5ae715cc7a4b47bb2a3a64355]
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Fix off by one in overlapping read pa... was committed by Colin 09:31 AM
Commit [1f2c0ea3606fc95e2793257aadf19d75f93d4167]
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Add more config options https://githu... was committed by Colin 09:01 AM
Commit [aa6fe838dd2e9115a5299e2edc9ab4b528c056d8]
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Add more config options https://githu... was committed by Colin 08:58 AM
Commit [388393ece8d7fa5eee4411659418f0745be8e3a0]
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Docs for hideIncorrectAlignments http... was committed by Colin 08:40 AM
Commit [d685ae5a00ba731f6ceefbed6d822add23315cd6]
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Add more docs https://github.com/GMOD... was committed by Colin 08:32 AM
Commit [aaa0dc2000d479422f4ea2a12c6bb59cdd200ade]
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Initial paired read docs https://gith... was committed by Colin 08:32 AM
Commit [175eb13873d7dbe23a13aab1e46fc6de5782c86b]
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More paired read docs https://github.... was committed by Colin 08:32 AM
Commit [7e3b81601ff9b24b3fdaa52135775b3fa31593ee]
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Add to operation buffer if it is empt... was committed by Colin
Thursday Dec 06

Commit [3e8e9fde1a4a91b08fd046849811de42ecffbba4]
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Bump @gmod/cram https://github.com/GM... was committed by Colin 12:27 PM
Commit [99178588fdd683a9ef68d1e05c476003ab296246]
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Bump indexedfasta https://github.com/... was committed by Colin 06:15 AM
Commit [d728e46f947f892cbd4707af1580c23263c7db4c]
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Fix storeTimeout calculation and add ... was committed by Colin 06:15 AM
Commit [2983d28c5c9f583a1885d4d122e902dc2518c131]
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Avoid drawing overlap at zoomed out l... was committed by Colin
Tuesday Dec 04

Commit [bab672bac81e4bfe7a254cda157781dca4c108a9]
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Check for mismatches from one list th... was committed by Colin 10:45 AM
Commit [be02ac250cff08f222a0de93df8d44137c8b0456]
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