Overview - JBrowse - jbrowse

depend on @gmod/cram 1.3.0 to get sup... was committed by Robert Buels
Tuesday Jul 31

Commit [9297cb4b4e77dbe916e68cd98b6eb3867e8cade9]
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Fix issue with mismatch base https://... was committed by Colin 02:13 PM
Commit [241d2d82b2534b5508687d914483b7c9c0613205]
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Revert "filter cram read features out... was committed by Colin 01:05 PM
Commit [52276557fa6202614a979117f3e7e82a194eaa64]
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Use length instead of modified base h... was committed by Colin 12:38 PM
Commit [639f18f849ce5d9e5c2acf702409557878ddb172]
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filter cram read features out of alig... was committed by Robert Buels 11:36 AM
Commit [a62493c963bc6c2d7f4c41d00424c578e01bf6c9]
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fix cram feature detail dialogs https... was committed by Robert Buels 11:36 AM
Commit [298d30d83dd2144fbd47389a378be678c7eb8197]
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depend on @gmod/cram 1.2.0, which cal... was committed by Robert Buels
Monday Jul 30

Commit [fc67cff9f9e9ddb5419ab592572b66607d914017]
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Add PairedAlignment glyph https://git... was committed by Colin 05:01 PM
Commit [040d7134fd49529a46fd0ae33f36c0e375a9c2a5]
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Add paired end sample data https://gi... was committed by Colin 05:01 PM
Commit [0e5b2db66a63f774fe99e6e3d3cd49cfb66eace1]
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Restructure code to do refetching htt... was committed by Colin 05:01 PM
Commit [323092d7a0a6b024632e8133828c17218f2e7633]
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Remove some dead code https://github.... was committed by Colin 05:01 PM
Commit [f7b7715a772b1060b1452b06d859389821500f03]
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Initial bam pairs, probably will be r... was committed by Colin 05:01 PM
Commit [77ae3825a38eca9e06cefdcbfa245b9d07f0a6cb]
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Use mixin instead of specific pair st... was committed by Colin 05:01 PM
Commit [28b169512dd03223853d2effe91bcb397a007be1]
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Add container concept https://github.... was committed by Colin 05:01 PM
Commit [6dc7bebe6cc3cb2481044f45d5013428ef3c8c25]
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Pair types https://github.com/GMOD/jb... was committed by Colin 05:01 PM
Commit [df69f1a5bae1ed5bd2bbe5e3a36ee61f8cf250ee]
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Put delay behind the inheritence mode... was committed by Colin 05:01 PM
Commit [57332f0ee5bcd8d74556aca3bfd687449e3d72f1]
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Remove PairedReadAssociator https://g... was committed by Colin 05:01 PM
Commit [2e6bd2c00d7505d8ce7e599f90a6ee7237f583b7]
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Put delay behind the inheritence mode... was committed by Colin 04:58 PM
Commit [6debbed1563e46c3dc6c6470c5ea6e94adaf26f9]
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Remove PairedReadAssociator https://g... was committed by Colin 04:58 PM
Commit [16fd655245201489cba5764d577273f213acdf99]
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Add container concept https://github.... was committed by Colin 04:58 PM
Commit [7b705a2f2611b3c4b3a5339ccd0978c3c334a7d1]
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Merge pull request #1144 from GMOD/fi... was committed by Robert Buels 01:09 PM
Commit [d72f5afcac6dca2de874a6daf338e94d416d1f14]
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Merge pull request #1145 from GMOD/ha... was committed by Robert Buels 01:05 PM
Commit [36931f76506f4b86a175ad4538f9ef59cd5b9a85]
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Update release-notes.md [skip ci] htt... was committed by Colin 07:43 AM
Commit [dde2d1f0dbca26c77d5c9da89732d147b438ebd9]
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Fix bug where prepare-refseqs.pl with... was committed by Colin 07:41 AM
Commit [475f1f55ed6f477ec2ce40d63807e23c02d72445]
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Remove test console log [skip ci] htt... was committed by Colin 05:40 AM
Commit [8455f98e84617858d954e7ff8e3d4679ae30a5a4]
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Compare direct types https://github.c... was committed by Colin 05:09 AM
Commit [ba4be31cc5dffef7c4d5f8a07c3c05de97d216aa]
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Use raw crc32 hash of bam bytes for f... was committed by Colin 04:52 AM
Commit [7c9173a6bee1c110604f0b71f644e603b0762563]
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Compare direct types https://github.c... was committed by Colin 04:52 AM
Commit [7c94d3e26b7e7532ee1919f6b4565c8827e4d55e]
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Add default argument for crc and crc3... was committed by Colin 04:43 AM
Commit [bd057e091cf05af007dff291c90bc3568536b570]
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twobit store should expectRanges http... was committed by Robert Buels
Sunday Jul 29

Commit [99bc3b8dad4e0be1fdb503e0ac010241cdf175c1]
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let's not throw bare strings https://... was committed by Robert Buels 11:04 AM
Commit [7cef50d854a32a4d0811bf82e31e684670925ef4]
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upgrade to @gmod/twobit 1.1.0 to add ... was committed by Robert Buels
Saturday Jul 28

Commit [b76c275f2e1085cb693b117a50e96b74ccc08d52]
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update yarn lock https://github.com/G... was committed by Robert Buels 04:11 PM
Commit [94af3acfbfd2d0bbdd79030752470ae4fbb7678b]
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add a little bit of error logging to ... was committed by Robert Buels 04:10 PM
Commit [f6ae08423b1772624da336868ab07a50f7707629]
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upgrade @gmod/twobit to pull in a bug... was committed by Robert Buels 04:10 PM
Commit [6b77a8cb1f890add235112f48f083a03227372a6]
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get twobit.spec.js passing https://gi... was committed by Robert Buels
Friday Jul 27

Commit [56755dca59e8513da24823397bb4f7a06fd29879]
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use @gmod/twobit for JBrowse/Store/Se... was committed by Robert Buels 06:54 PM
Commit [1006113b1b0ba58276ddadd4dcd2e12c88e43273]
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allow symlinks to be used with webpac... was committed by Robert Buels 12:13 PM
Commit [dd1aa14d5f76167a3db64c1b77b95b39df4638c3]
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Add hideSecondary false to tomato con... was committed by Colin
Thursday Jul 26

Commit [c6e0f3e8e231303b07cf35222fdcd62b2f7d1689]
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Deduplicate crc32 raw https://github.... was committed by Colin 09:04 AM
Commit [f4bfad2a32403a007bf2c2a61e7aa377bab18e50]
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Add tomato test data https://github.c... was committed by Colin 09:02 AM
Commit [d24fc8c8ecfdc782d073ff2ec2b14362369e2275]
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Use raw crc32 hash of bam bytes for f... was committed by Colin 08:58 AM
Commit [6f3692a5818ee12ff81432d0f079f34e42315156]
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Add tests for dataRoot https://github... was committed by Colin 08:34 AM
Commit [0cc1feabf435e20906cab3085e8941c73412439c]
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Add tests for dataRoot https://github... was committed by Colin 08:33 AM
Commit [66f736b72cd43fdda4d57af6b5618ac014f3eff0]
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Add tests for dataRoot https://github... was committed by Colin 08:33 AM
Commit [9e38c8a2f928d522bcf76f38d89fd8b5bd239fd5]
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Add tests for dataRoot https://github... was committed by Colin 08:29 AM
Commit [0ff80bc9f139f57036a97327c96c95407a8b70e2]
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Fix dataRoot config https://github.co... was committed by Colin 08:19 AM
Commit [71dcd494effb263592cb9cb8b1fc3b3c78a476b3]
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Fix problem with templates being fill... was committed by Colin 07:32 AM
Commit [03a1dd61d6e3e3430aeca19c32a71af5bb807ba1]
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Propagate fix for multi-valued attrib... was committed by Colin
Tuesday Jul 24

Commit [b883c9a394883d4d91722d04bb87684008403b11]
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Use pretty for output for trackList.j... was committed by Colin 05:35 AM
Commit [552a4f4ff4ce11c670dbf8f52449a26e0a34027f]
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