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Changeset [0eb6e165ee93652566b329a68c88f0e7bc66a273] by Robert Buels

Revision 0eb6e165ee93652566b329a68c88f0e7bc66a273, committed by Robert Buels · April 13th, 2012 @ 10:27 AM

48 changed files

• M bin/bam-to-json.pl
• M bin/biodb-to-json.pl
• M bin/draw-basepair-track.pl
• M bin/flatfile-to-json.pl
• M bin/generate-names.pl
• M bin/prepare-refseqs.pl
• M bin/remove-track.pl
• M bin/ucsc-to-json.pl
• M bin/wig-to-json.pl
• M lib/Bio/JBrowse/ArrayRepr.pm
• M lib/Bio/JBrowse/BioperlFlattener.pm
• M lib/Bio/JBrowse/ExternalSorter.pm
• M lib/Bio/JBrowse/FastaDatabase.pm
• M lib/Bio/JBrowse/FeatureTrack.pm
• M lib/Bio/JBrowse/GenomeDB.pm
• M lib/Bio/JBrowse/ImageTrack.pm
• M lib/Bio/JBrowse/ImageTrackRenderer.pm
• M lib/Bio/JBrowse/IntervalStore.pm
• M lib/Bio/JBrowse/JsonFileStorage.pm
• M lib/Bio/JBrowse/JsonGenerator.pm
• M lib/Bio/JBrowse/LazyNCList.pm
• M lib/Bio/JBrowse/LazyPatricia.pm
• M lib/Bio/JBrowse/NCLSorter.pm
• M lib/Bio/JBrowse/NCList.pm
• M lib/Bio/JBrowse/NameHandler.pm
• M lib/Bio/JBrowse/Script/FlatFileToJson.pm
• M lib/Bio/JBrowse/Script/FlatFileToJson/FeatureStream/BioPerl.pm
• M lib/Bio/JBrowse/Script/FlatFileToJson/FeatureStream/GFF3_LowLevel.pm
• M lib/Bio/JBrowse/Script/RemoveTrack.pm
• M lib/Bio/JBrowse/TiledImage.pm
• M lib/Bio/JBrowse/TiledImage/DBPrimStorage.pm
• M lib/Bio/JBrowse/TiledImage/MemoryPrimStorage.pm
• M lib/Bio/JBrowse/TiledImage/demo-tiledimage.pl
• M lib/Bio/JBrowse/TrackImage.pm
• M tests/perl_tests/00.compile.t
• M tests/perl_tests/FastaDatabase.t
• M tests/perl_tests/bam-to-json.pl.t
• M tests/perl_tests/biodb-to-json.pl.t
• M tests/perl_tests/draw-basepair-track.pl.t
• M tests/perl_tests/fakefasta.t
• M tests/perl_tests/flatfile-to-json.pl.t
• M tests/perl_tests/lazy_nclist.t
• M tests/perl_tests/lib/FileSlurping.pm
• M tests/perl_tests/nclist.t
• M tests/perl_tests/prepare-refseqs.pl.t
• M tests/perl_tests/remove-track.pl.t
• M tests/perl_tests/ucsc-to-json.pl.t
• M tests/perl_tests/wig-to-json.pl.t