Changeset [22838cb71f599307d0a6f7700f124815cf97571f] by Eric Rasche

December 4th, 2015 @ 02:41 PM

Allow overriding start/stop characters for highlighting

Originally only Ms were highlighted, instead of highlighting things which are actually starts.
E.g. TTG, even though it is a recognised start codon in table 1, it translates to L by default.
The built in highlighter was not aware of the distinction and thus didn't highlight it as a possible
start codon.

Configuration options are supplied to allow users to override this setting, just like they can with .
https://github.com/GMOD/jbrowse/commit/22838cb71f599307d0a6f7700f12...

Committed by Eric Rasche

  • M css/sequence.css
  • M src/JBrowse/CodonTable.js
  • M src/JBrowse/View/Track/Sequence.js
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AJAX Genome Browser