Changeset [3686e13877d120c98ab8ac8b071715ce115684a8] by Nathan Dunn

May 5th, 2017 @ 10:42 AM

  • A docs/tutorial/data_files/volvox.2bit
  • A src/JBrowse/Store/SeqFeature/TwoBit.js
  • A src/JBrowse/Store/SeqFeature/TwoBit/File.js
  • A src/JBrowse/Store/Sequence/TwoBit.js
  • A src/JBrowse/View/FileDialog/TrackList/TwoBitDriver.js
  • A tests/data/T_ko.2bit
  • A tests/data/empty.2bit
  • A tests/data/foo.2bit
  • A tests/data/volvox-largedel.bam
  • A tests/data/volvox-largedel.bam.bai
  • A tests/data/volvox-long-reads.fastq.sorted.bam
  • A tests/data/volvox-long-reads.fastq.sorted.bam.bai
  • A tests/data/volvox-rnasim.bam
  • A tests/data/volvox-rnasim.bam.bai
  • A tests/data/volvox.2bit
  • A tests/js_tests/spec/TwoBit.spec.js
  • M ".gitignore"
  • M ".travis.yml"
  • M bin/prepare-refseqs.pl
  • M build/Makefile
  • M css/main.css
  • M docs/tutorial/data_files/volvox-sorted.bam.conf
  • M index.html
  • M package.json
  • M plugins/HideTrackLabels/js/main.js
  • M release-notes.txt
  • M setup.sh
  • M src/JBrowse/Browser.js
  • M src/JBrowse/ConfigAdaptor/JB_json_v1.js
  • M src/JBrowse/GenomeView.js
  • M src/JBrowse/Store/SeqFeature/SequenceChunks.js
  • M src/JBrowse/Store/SeqFeature/_MismatchesMixin.js
  • M src/JBrowse/View/Export/GFF3.js
  • M src/JBrowse/View/FASTA.js
  • M src/JBrowse/View/FastaFileDialog.js
  • M src/JBrowse/View/FeatureGlyph/ProcessedTranscript.js
  • M src/JBrowse/View/FileDialog/ResourceList.js
  • M src/JBrowse/View/FileDialog/TrackList/BAMDriver.js
  • M src/JBrowse/View/FileDialog/TrackList/IndexedFASTADriver.js
  • M src/JBrowse/View/Track/Wiggle/XYPlot.js
  • M src/JBrowse/View/Track/_AlignmentsMixin.js
  • M src/JBrowse/View/Track/_FeatureDetailMixin.js
  • M src/JBrowse/package.json
  • M src/perl5/Bio/JBrowse/Cmd/FormatSequences.pm
  • M tests/js_tests/index.html
  • M tests/js_tests/spec/AddFiles.spec.js
  • M tests/js_tests/spec/BAM.spec.js
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