Changeset [4cf41b74141c02747771cbe8dfe2605dfbc75222] by Robert Buels

February 26th, 2018 @ 04:29 PM

Merge pull request #1007 from GMOD/refseqorder

ref sequence order enhancements, fixes #925, fixes #919
https://github.com/GMOD/jbrowse/commit/4cf41b74141c02747771cbe8dfe2...

Committed by Robert Buels

  • A sample_data/raw/random_contigs.fa
  • A tests/data/random_contigs_formatted_refseqs/seq/4c4/04e/7c/ctg12344-0.txt
  • A tests/data/random_contigs_formatted_refseqs/seq/8e5/250/ac/ctg232-0.txt
  • A tests/data/random_contigs_formatted_refseqs/seq/af2/43d/7e/ctg34532223-0.txt
  • A tests/data/random_contigs_formatted_refseqs/seq/efb/e96/28/ctg343453-0.txt
  • A tests/data/random_contigs_formatted_refseqs/seq/refSeqs.json
  • A tests/data/random_contigs_formatted_refseqs/trackList.json
  • A tests/data/random_contigs_formatted_refseqs/tracks.conf
  • M bin/prepare-refseqs.pl
  • M release-notes.txt
  • M src/JBrowse/Browser.js
  • M src/perl5/Bio/JBrowse/Cmd/FormatSequences.pm
  • M tests/perl_tests/prepare-refseqs.pl.t
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