Changeset [72294322ecba5ff286625f56d2de23fce6baa164] by Robert Buels
Revision 72294322ecba5ff286625f56d2de23fce6baa164,
committed by Robert Buels
· May 29th, 2012 @ 03:42 PM
refactor biodb-to-json.pl to be a Bio::JBrowse::Cmd module, make
the json it produces contain all available data fields. references
#72
https://github.com/GMOD/jbrowse/commit/72294322ecba5ff286625f56d2de...
9 changed files
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lib/Bio/JBrowse/Cmd/BioDBToJson.pm -
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lib/Bio/JBrowse/Cmd/NCFormatter.pm -
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bin/biodb-to-json.pl -
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lib/Bio/JBrowse/Cmd/FlatFileToJson.pm -
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lib/Bio/JBrowse/FeatureStream.pm -
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lib/Bio/JBrowse/FeatureStream/BioPerl.pm -
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lib/IntervalStore.pm -
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tests/perl_tests/biodb-to-json.pl.t -
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tests/perl_tests/flatfile-to-json.pl.t