Changeset [937d981abed49c95d63b571e88d547664e0dbb21] by Robert Buels
Revision 937d981abed49c95d63b571e88d547664e0dbb21,
committed by Robert Buels
· March 8th, 2018 @ 02:16 PM
Merge branch 'dev' into add_chunk_caching
https://github.com/GMOD/jbrowse/commit/937d981abed49c95d63b571e88d5...
74 changed files
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".editorconfig" -
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build/datestamp_release_notes.pl -
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build/release.sh -
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build/set_package_versions.pl -
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docs/tutorial/data_files/volvox.bw.gff3.gz.conf -
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docs/tutorial/data_files/volvox_segment.bed -
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img/browserstack-logo-600x315.png -
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sample_data/raw/random_contigs.fa -
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tests/data/random_contigs_formatted_refseqs/seq/4c4/04e/7c/ctg12344-0.txt -
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tests/data/random_contigs_formatted_refseqs/seq/8e5/250/ac/ctg232-0.txt -
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tests/data/random_contigs_formatted_refseqs/seq/af2/43d/7e/ctg34532223-0.txt -
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tests/data/random_contigs_formatted_refseqs/seq/efb/e96/28/ctg343453-0.txt -
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tests/data/random_contigs_formatted_refseqs/seq/refSeqs.json -
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tests/data/random_contigs_formatted_refseqs/trackList.json -
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tests/data/random_contigs_formatted_refseqs/tracks.conf -
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tests/data/vcf.end.gz -
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tests/data/vcf.end.gz.tbi -
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tests/perl_tests/add-bam-track.pl.t -
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tests/selenium_tests/travis_wrapper.sh -
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".gitignore" -
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".travis.yml" -
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README.md -
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bin/add-bam-track.pl -
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bin/add-bw-track.pl -
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bin/prepare-refseqs.pl -
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build/Makefile -
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build/format_release_notes.pl -
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css/main.css -
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css/track_styles.css -
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docs/tutorial/conf_files/volvox.json -
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docs/tutorial/data_files/functions.conf -
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docs/tutorial/data_files/volvox.gff3 -
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docs/tutorial/data_files/volvox.sort.gff3.gz.conf -
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docs/tutorial/data_files/volvox.test.vcf.gz -
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docs/tutorial/data_files/volvox.test.vcf.gz.tbi -
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index.html -
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package.json -
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plugins/HideTrackLabels/js/main.js -
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release-notes.txt -
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sample_data/json/modencode/trackList.json -
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setup.sh -
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src/JBrowse/Browser.js -
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src/JBrowse/GenomeView.js -
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src/JBrowse/QueryParamConfigMapper.js -
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src/JBrowse/Store/SeqFeature/BAM/LazyFeature.js -
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src/JBrowse/Store/SeqFeature/GFF3Tabix.js -
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src/JBrowse/Store/SeqFeature/VCFTabix.js -
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src/JBrowse/Store/SeqFeature/VCFTabix/LazyFeature.js -
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src/JBrowse/Store/SeqFeature/VCFTabix/Parser.js -
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src/JBrowse/TouchScreenSupport.js -
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src/JBrowse/Util.js -
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src/JBrowse/View/Track/BlockBased.js -
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src/JBrowse/View/Track/CanvasFeatures.js -
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src/JBrowse/View/Track/Combination.js -
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src/JBrowse/View/Track/SNPCoverage.js -
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src/JBrowse/View/Track/_FeatureDetailMixin.js -
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src/JBrowse/View/Track/_VariantDetailMixin.js -
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src/JBrowse/has.js -
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src/JBrowse/package.json -
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src/perl5/Bio/JBrowse/Cmd/FormatSequences.pm -
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src/perl5/Bio/JBrowse/FeatureStream.pm -
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tests/js_tests/index.html -
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tests/js_tests/spec/BAM.spec.js -
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tests/js_tests/spec/QueryParamConfigMapper.spec.js -
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tests/js_tests/spec/Util.spec.js -
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tests/js_tests/spec/VCF.spec.js -
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tests/perl_tests/prepare-refseqs.pl.t -
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tests/selenium_tests/jasmine_test.py -
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tests/selenium_tests/jbrowse_selenium/JBrowseTest.py -
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tests/selenium_tests/volvox_REST_names_test.py -
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tests/selenium_tests/volvox_biodb_test.py -
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tests/selenium_tests/yeast_biodb_test.py -
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utils/jb_run.js -
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utils/jb_setup.js