Changeset: Changeset [9eb67fbac825720941e04b5e7efa908e35d068ae] by Robert Buels - JBrowse

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Changeset [9eb67fbac825720941e04b5e7efa908e35d068ae] by Robert Buels

June 28th, 2012 @ 08:41 AM

Merge branch 'amd' into bigwig

Conflicts:

compat_121.html
index.html
js/ConfigAdaptor/JB_json_v0.js
js/ConfigAdaptor/JB_json_v1.js
js/Track/YScaleMixin.js
js/View/Track/YScaleMixin.js
src/JBrowse/Browser.js
src/JBrowse/FeatureTrack.js
src/JBrowse/GridTrack.js
src/JBrowse/ImageTrack.js
src/JBrowse/ImageTrack/Wiggle.js
src/JBrowse/SequenceTrack.js
src/JBrowse/StaticTrack.js
src/JBrowse/Track.js
src/JBrowse/Track/YScaleMixin.js

https://github.com/GMOD/jbrowse/commit/9eb67fbac825720941e04b5e7efa...

Committed by Robert Buels

A src/JBrowse/Animation.js
A src/JBrowse/ArrayRepr.js
A src/JBrowse/BehaviorManager.js
A src/JBrowse/Browser.js
A src/JBrowse/ConfigAdaptor/JB_json_v0.js
A src/JBrowse/ConfigAdaptor/JB_json_v1.js
A src/JBrowse/FeatureTrack.js
A src/JBrowse/Finisher.js
A src/JBrowse/GenomeView.js
A src/JBrowse/GridTrack.js
A src/JBrowse/ImageTrack.js
A src/JBrowse/ImageTrack/Wiggle.js
A src/JBrowse/Layout.js
A src/JBrowse/LazyArray.js
A src/JBrowse/Model/AutocompleteStore.js
A src/JBrowse/Model/TrackMetaData.js
A src/JBrowse/Model/modEncodeTrackMetadata.js
A src/JBrowse/NCList.js
A src/JBrowse/NCList_v0.js
A src/JBrowse/Ruler.js
A src/JBrowse/SeqFeatureStore.js
A src/JBrowse/SeqFeatureStore/NCList.js
A src/JBrowse/SeqFeatureStore/NCList_v0.js
A src/JBrowse/SequenceStore/StaticChunked.js
A src/JBrowse/SequenceTrack.js
A src/JBrowse/Slider.js
A src/JBrowse/StaticTrack.js
A src/JBrowse/Store.js
A src/JBrowse/Store/LazyTrie.js
A src/JBrowse/TiledImageStore/Fixed.js
A src/JBrowse/TiledImageStore/Fixed_v0.js
A src/JBrowse/Track.js
A src/JBrowse/Track/YScaleMixin.js
A src/JBrowse/Util.js
A src/JBrowse/View/TrackList/Faceted.js
A src/JBrowse/View/TrackList/Null.js
A src/JBrowse/View/TrackList/Simple.js
A src/JBrowse/Zoomer.js
A src/JBrowse/touchJBrowse.js
A src/dijit
A src/dojo
A src/dojox
A src/jbrowse_dojo.profile.js
A src/jbrowse_dojo_build.sh
A src/jsdoc_toolkit-2.4.0/README.txt
A src/jsdoc_toolkit-2.4.0/app/frame.js
A src/jsdoc_toolkit-2.4.0/app/frame/Chain.js
A src/jsdoc_toolkit-2.4.0/app/frame/Dumper.js
A src/jsdoc_toolkit-2.4.0/app/frame/Hash.js
A src/jsdoc_toolkit-2.4.0/app/frame/Link.js
A src/jsdoc_toolkit-2.4.0/app/frame/Namespace.js
A src/jsdoc_toolkit-2.4.0/app/frame/Opt.js
A src/jsdoc_toolkit-2.4.0/app/frame/Reflection.js
A src/jsdoc_toolkit-2.4.0/app/frame/String.js
A src/jsdoc_toolkit-2.4.0/app/frame/Testrun.js
A src/jsdoc_toolkit-2.4.0/app/handlers/FOODOC.js
A src/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC.js
A src/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/DomReader.js
A src/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/XMLDoc.js
A src/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/XMLParse.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/DocComment.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/DocTag.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/JsDoc.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/JsPlate.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Lang.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Parser.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/PluginManager.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Symbol.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/SymbolSet.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TextStream.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Token.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TokenReader.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TokenStream.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Util.js
A src/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Walker.js
A src/jsdoc_toolkit-2.4.0/app/main.js
A src/jsdoc_toolkit-2.4.0/app/plugins/commentSrcJson.js
A src/jsdoc_toolkit-2.4.0/app/plugins/frameworkPrototype.js
A src/jsdoc_toolkit-2.4.0/app/plugins/functionCall.js
A src/jsdoc_toolkit-2.4.0/app/plugins/publishSrcHilite.js
A src/jsdoc_toolkit-2.4.0/app/plugins/symbolLink.js
A src/jsdoc_toolkit-2.4.0/app/plugins/tagParamConfig.js
A src/jsdoc_toolkit-2.4.0/app/plugins/tagSynonyms.js
A src/jsdoc_toolkit-2.4.0/app/run.js
A src/jsdoc_toolkit-2.4.0/app/t/TestDoc.js
A src/jsdoc_toolkit-2.4.0/app/t/runner.js
A src/jsdoc_toolkit-2.4.0/app/test.js
A src/jsdoc_toolkit-2.4.0/app/test/addon.js
A src/jsdoc_toolkit-2.4.0/app/test/anon_inner.js
A src/jsdoc_toolkit-2.4.0/app/test/augments.js
A src/jsdoc_toolkit-2.4.0/app/test/augments2.js
A src/jsdoc_toolkit-2.4.0/app/test/borrows.js
A src/jsdoc_toolkit-2.4.0/app/test/borrows2.js
A src/jsdoc_toolkit-2.4.0/app/test/config.js
A src/jsdoc_toolkit-2.4.0/app/test/constructs.js
A src/jsdoc_toolkit-2.4.0/app/test/encoding.js
A src/jsdoc_toolkit-2.4.0/app/test/encoding_other.js
A src/jsdoc_toolkit-2.4.0/app/test/event.js
A src/jsdoc_toolkit-2.4.0/app/test/exports.js
A src/jsdoc_toolkit-2.4.0/app/test/functions_anon.js
A src/jsdoc_toolkit-2.4.0/app/test/functions_nested.js
A src/jsdoc_toolkit-2.4.0/app/test/global.js
A src/jsdoc_toolkit-2.4.0/app/test/globals.js
A src/jsdoc_toolkit-2.4.0/app/test/ignore.js
A src/jsdoc_toolkit-2.4.0/app/test/inner.js
A src/jsdoc_toolkit-2.4.0/app/test/jsdoc_test.js
A src/jsdoc_toolkit-2.4.0/app/test/lend.js
A src/jsdoc_toolkit-2.4.0/app/test/memberof.js
A src/jsdoc_toolkit-2.4.0/app/test/memberof2.js
A src/jsdoc_toolkit-2.4.0/app/test/memberof3.js
A src/jsdoc_toolkit-2.4.0/app/test/memberof_constructor.js
A src/jsdoc_toolkit-2.4.0/app/test/module.js
A src/jsdoc_toolkit-2.4.0/app/test/multi_methods.js
A src/jsdoc_toolkit-2.4.0/app/test/name.js
A src/jsdoc_toolkit-2.4.0/app/test/namespace_nested.js
A src/jsdoc_toolkit-2.4.0/app/test/nocode.js
A src/jsdoc_toolkit-2.4.0/app/test/oblit_anon.js
A src/jsdoc_toolkit-2.4.0/app/test/overview.js
A src/jsdoc_toolkit-2.4.0/app/test/param_inline.js
A src/jsdoc_toolkit-2.4.0/app/test/params_optional.js
A src/jsdoc_toolkit-2.4.0/app/test/prototype.js
A src/jsdoc_toolkit-2.4.0/app/test/prototype_nested.js
A src/jsdoc_toolkit-2.4.0/app/test/prototype_oblit.js
A src/jsdoc_toolkit-2.4.0/app/test/prototype_oblit_constructor.js
A src/jsdoc_toolkit-2.4.0/app/test/public.js
A src/jsdoc_toolkit-2.4.0/app/test/scripts/code.js
A src/jsdoc_toolkit-2.4.0/app/test/scripts/notcode.txt
A src/jsdoc_toolkit-2.4.0/app/test/shared.js
A src/jsdoc_toolkit-2.4.0/app/test/shared2.js
A src/jsdoc_toolkit-2.4.0/app/test/shortcuts.js
A src/jsdoc_toolkit-2.4.0/app/test/static_this.js
A src/jsdoc_toolkit-2.4.0/app/test/synonyms.js
A src/jsdoc_toolkit-2.4.0/app/test/tosource.js
A src/jsdoc_toolkit-2.4.0/app/test/variable_redefine.js
A src/jsdoc_toolkit-2.4.0/changes.txt
A src/jsdoc_toolkit-2.4.0/conf/sample.conf
A src/jsdoc_toolkit-2.4.0/java/build.xml
A src/jsdoc_toolkit-2.4.0/java/build_1.4.xml
A src/jsdoc_toolkit-2.4.0/java/classes/js.jar
A src/jsdoc_toolkit-2.4.0/java/src/JsDebugRun.java
A src/jsdoc_toolkit-2.4.0/java/src/JsRun.java
A src/jsdoc_toolkit-2.4.0/jsdebug.jar
A src/jsdoc_toolkit-2.4.0/jsrun.jar
A src/jsdoc_toolkit-2.4.0/jsrun.sh
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/allclasses.tmpl
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/allfiles.tmpl
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/class.tmpl
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/index.tmpl
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/publish.js
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/static/default.css
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/static/header.html
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/static/index.html
A src/jsdoc_toolkit-2.4.0/templates/jsdoc/symbol.tmpl
A src/perl5/ArrayRepr.pm
A src/perl5/Bio/FeatureIO/bed.pm
A src/perl5/Bio/JBrowse/Cmd.pm
A src/perl5/Bio/JBrowse/Cmd/BioDBToJson.pm
A src/perl5/Bio/JBrowse/Cmd/FlatFileToJson.pm
A src/perl5/Bio/JBrowse/Cmd/NCFormatter.pm
A src/perl5/Bio/JBrowse/Cmd/RemoveTrack.pm
A src/perl5/Bio/JBrowse/FeatureStream.pm
A src/perl5/Bio/JBrowse/FeatureStream/BioPerl.pm
A src/perl5/Bio/JBrowse/FeatureStream/GFF3_LowLevel.pm
A src/perl5/ExternalSorter.pm
A src/perl5/FastaDatabase.pm
A src/perl5/FeatureTrack.pm
A src/perl5/GenomeDB.pm
A src/perl5/ImageTrack.pm
A src/perl5/ImageTrackRenderer.pm
A src/perl5/IntervalStore.pm
A src/perl5/JBlibs.pm
A src/perl5/JsonFileStorage.pm
A src/perl5/JsonGenerator.pm
A src/perl5/LazyNCList.pm
A src/perl5/LazyPatricia.pm
A src/perl5/NCLSorter.pm
A src/perl5/NCList.pm
A src/perl5/NameHandler.pm
A src/perl5/TiledImage.pm
A src/perl5/TiledImage/DBPrimStorage.pm
A src/perl5/TiledImage/MemoryPrimStorage.pm
A src/perl5/TiledImage/demo-tiledimage.pl
A src/perl5/TiledImage/gdtile.sql
A src/perl5/TrackImage.pm
A src/util
R dist.ini
R js/LazyPatricia.js
R js/Util.js
R jslib/dijit/CheckedMenuItem.js
R jslib/dijit/Menu.js
R jslib/dijit/MenuItem.js
R jslib/dijit/MenuSeparator.js
R jslib/dijit/PopupMenuItem.js
R jslib/dijit/Tooltip.js
R jslib/dijit/_Contained.js
R jslib/dijit/_Container.js
R jslib/dijit/_HasDropDown.js
R jslib/dijit/_KeyNavContainer.js
R jslib/dijit/_Templated.js
R jslib/dijit/_Widget.js
R jslib/dijit/_base.js
R jslib/dijit/_base/focus.js
R jslib/dijit/_base/manager.js
R jslib/dijit/_base/place.js
R jslib/dijit/_base/popup.js
R jslib/dijit/_base/scroll.js
R jslib/dijit/_base/sniff.js
R jslib/dijit/_base/typematic.js
R jslib/dijit/_base/wai.js
R jslib/dijit/_base/window.js
R jslib/dijit/form/ComboBox.js
R jslib/dijit/form/FilteringSelect.js
R jslib/dijit/form/Select.js
R jslib/dijit/form/TextBox.js
R jslib/dijit/form/ValidationTextBox.js
R jslib/dijit/form/_FormSelectWidget.js
R jslib/dijit/form/_FormWidget.js
R jslib/dijit/themes/a11y/README.txt
R jslib/dijit/themes/a11y/colors3x4.png
R jslib/dijit/themes/a11y/colors7x10.png
R jslib/dijit/themes/a11y/indeterminate_progress.gif
R jslib/dijit/themes/dijit.css
R jslib/dijit/themes/dijit_rtl.css
R jslib/dijit/themes/nihilo/Calendar.css
R jslib/dijit/themes/nihilo/Calendar_rtl.css
R jslib/dijit/themes/nihilo/ColorPalette.css
R jslib/dijit/themes/nihilo/Common.css
R jslib/dijit/themes/nihilo/Dialog.css
R jslib/dijit/themes/nihilo/Dialog_rtl.css
R jslib/dijit/themes/nihilo/Editor.css
R jslib/dijit/themes/nihilo/Editor_rtl.css
R jslib/dijit/themes/nihilo/Menu.css
R jslib/dijit/themes/nihilo/Menu_rtl.css
R jslib/dijit/themes/nihilo/ProgressBar.css
R jslib/dijit/themes/nihilo/TimePicker.css
R jslib/dijit/themes/nihilo/TitlePane.css
R jslib/dijit/themes/nihilo/TitlePane_rtl.css
R jslib/dijit/themes/nihilo/Toolbar.css
R jslib/dijit/themes/nihilo/Tree.css
R jslib/dijit/themes/nihilo/Tree_rtl.css
R jslib/dijit/themes/nihilo/form/Button.css
R jslib/dijit/themes/nihilo/form/Button_rtl.css
R jslib/dijit/themes/nihilo/form/Checkbox.css
R jslib/dijit/themes/nihilo/form/ComboBox.css
R jslib/dijit/themes/nihilo/form/Common.css
R jslib/dijit/themes/nihilo/form/Common_rtl.css
R jslib/dijit/themes/nihilo/form/RadioButton.css
R jslib/dijit/themes/nihilo/form/Slider.css
R jslib/dijit/themes/nihilo/form/Slider_rtl.css
R jslib/dijit/themes/nihilo/form/TimeTextBox.css
R jslib/dijit/themes/nihilo/images/accordionItemActive.png
R jslib/dijit/themes/nihilo/images/buttonActive.png
R jslib/dijit/themes/nihilo/images/buttonDisabled.png
R jslib/dijit/themes/nihilo/images/buttonEnabled.png
R jslib/dijit/themes/nihilo/images/buttonHover.png
R jslib/dijit/themes/nihilo/images/dndCopy.png
R jslib/dijit/themes/nihilo/images/dndMove.png
R jslib/dijit/themes/nihilo/images/dndNoCopy.png
R jslib/dijit/themes/nihilo/images/dndNoMove.png
R jslib/dijit/themes/nihilo/images/editor.gif
R jslib/dijit/themes/nihilo/images/editorDisabled.gif
R jslib/dijit/themes/nihilo/images/editorDisabled_rtl.gif
R jslib/dijit/themes/nihilo/images/editor_rtl.gif
R jslib/dijit/themes/nihilo/images/no.gif
R jslib/dijit/themes/nihilo/images/preciseSliderThumb.gif
R jslib/dijit/themes/nihilo/images/preciseSliderThumb.png
R jslib/dijit/themes/nihilo/images/preciseSliderThumbFocus.gif
R jslib/dijit/themes/nihilo/images/preciseSliderThumbFocus.png
R jslib/dijit/themes/nihilo/images/progressBarAnim.gif
R jslib/dijit/themes/nihilo/images/progressBarEmpty.png
R jslib/dijit/themes/nihilo/images/progressBarFull.png
R jslib/dijit/themes/nihilo/images/sliderEmpty.png
R jslib/dijit/themes/nihilo/images/sliderEmptyVertical.png
R jslib/dijit/themes/nihilo/images/sliderFull.png
R jslib/dijit/themes/nihilo/images/sliderFullFocus.png
R jslib/dijit/themes/nihilo/images/sliderFullVertical.png
R jslib/dijit/themes/nihilo/images/sliderFullVerticalFocus.png
R jslib/dijit/themes/nihilo/images/sliderThumb.gif
R jslib/dijit/themes/nihilo/images/sliderThumb.png
R jslib/dijit/themes/nihilo/images/sliderThumbFocus.gif
R jslib/dijit/themes/nihilo/images/sliderThumbFocus.png
R jslib/dijit/themes/nihilo/images/splitContainerSizerH-thumb.png
R jslib/dijit/themes/nihilo/images/splitContainerSizerH.png
R jslib/dijit/themes/nihilo/images/splitContainerSizerV-thumb.png
R jslib/dijit/themes/nihilo/images/splitContainerSizerV.png
R jslib/dijit/themes/nihilo/images/spriteArrows.gif
R jslib/dijit/themes/nihilo/images/spriteArrows.png
R jslib/dijit/themes/nihilo/images/spriteCheckbox.gif
R jslib/dijit/themes/nihilo/images/spriteCheckbox.png
R jslib/dijit/themes/nihilo/images/spriteDivIcons.gif
R jslib/dijit/themes/nihilo/images/spriteDivIcons.png
R jslib/dijit/themes/nihilo/images/spriteRadio.gif
R jslib/dijit/themes/nihilo/images/spriteRadio.png
R jslib/dijit/themes/nihilo/images/spriteRoundedIconsSmall.gif
R jslib/dijit/themes/nihilo/images/spriteRoundedIconsSmall.png
R jslib/dijit/themes/nihilo/images/spriteTree.gif
R jslib/dijit/themes/nihilo/images/spriteTree.png
R jslib/dijit/themes/nihilo/images/spriteTree_rtl.gif
R jslib/dijit/themes/nihilo/images/spriteTree_rtl.png
R jslib/dijit/themes/nihilo/images/tabBottomActiveC.gif
R jslib/dijit/themes/nihilo/images/tabBottomActiveSpriteLR.gif
R jslib/dijit/themes/nihilo/images/tabBottomEnabledC.gif
R jslib/dijit/themes/nihilo/images/tabBottomEnabledSpriteLR.gif
R jslib/dijit/themes/nihilo/images/tabBottomHoverC.gif
R jslib/dijit/themes/nihilo/images/tabBottomHoverSpriteLR.gif
R jslib/dijit/themes/nihilo/images/tabContainerSprite.gif
R jslib/dijit/themes/nihilo/images/tabLeftChecked.gif
R jslib/dijit/themes/nihilo/images/tabRightChecked.gif
R jslib/dijit/themes/nihilo/images/tabStripe.gif
R jslib/dijit/themes/nihilo/images/tabStripeBottom.gif
R jslib/dijit/themes/nihilo/images/tabStripeLeft.gif
R jslib/dijit/themes/nihilo/images/tabStripeRight.gif
R jslib/dijit/themes/nihilo/images/titleBar.png
R jslib/dijit/themes/nihilo/images/titleBarActive.png
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R jslib/dijit/themes/nihilo/images/tooltipConnectorLeft.png
R jslib/dijit/themes/nihilo/images/tooltipConnectorRight.gif
R jslib/dijit/themes/nihilo/images/tooltipConnectorRight.png
R jslib/dijit/themes/nihilo/images/tooltipConnectorUp.gif
R jslib/dijit/themes/nihilo/images/tooltipConnectorUp.png
R jslib/dijit/themes/nihilo/images/treeExpand_loading.gif
R jslib/dijit/themes/nihilo/images/treeHover.png
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R jslib/dijit/themes/nihilo/images/treeI_half.gif
R jslib/dijit/themes/nihilo/images/treeI_half_rtl.gif
R jslib/dijit/themes/nihilo/images/treeI_rtl.gif
R jslib/dijit/themes/nihilo/images/validationInputBg.gif
R jslib/dijit/themes/nihilo/images/validationInputBg.png
R jslib/dijit/themes/nihilo/images/warning.png
R jslib/dijit/themes/nihilo/layout/AccordionContainer.css
R jslib/dijit/themes/nihilo/layout/AccordionContainer_rtl.css
R jslib/dijit/themes/nihilo/layout/BorderContainer.css
R jslib/dijit/themes/nihilo/layout/ContentPane.css
R jslib/dijit/themes/nihilo/layout/SplitContainer.css
R jslib/dijit/themes/nihilo/layout/TabContainer.css
R jslib/dijit/themes/nihilo/layout/TabContainer_rtl.css
R jslib/dijit/themes/nihilo/nihilo.css
R jslib/dijit/themes/nihilo/nihilo_rtl.css
R jslib/dijit/themes/soria/Calendar.css
R jslib/dijit/themes/soria/Calendar_rtl.css
R jslib/dijit/themes/soria/ColorPalette.css
R jslib/dijit/themes/soria/Common.css
R jslib/dijit/themes/soria/Dialog.css
R jslib/dijit/themes/soria/Dialog_rtl.css
R jslib/dijit/themes/soria/Editor.css
R jslib/dijit/themes/soria/Editor_rtl.css
R jslib/dijit/themes/soria/Menu.css
R jslib/dijit/themes/soria/Menu_rtl.css
R jslib/dijit/themes/soria/ProgressBar.css
R jslib/dijit/themes/soria/TimePicker.css
R jslib/dijit/themes/soria/TitlePane.css
R jslib/dijit/themes/soria/TitlePane_rtl.css
R jslib/dijit/themes/soria/Toolbar.css
R jslib/dijit/themes/soria/Tree.css
R jslib/dijit/themes/soria/Tree_rtl.css
R jslib/dijit/themes/soria/form/Button.css
R jslib/dijit/themes/soria/form/Button_rtl.css
R jslib/dijit/themes/soria/form/Checkbox.css
R jslib/dijit/themes/soria/form/ComboBox.css
R jslib/dijit/themes/soria/form/Common.css
R jslib/dijit/themes/soria/form/Common_rtl.css
R jslib/dijit/themes/soria/form/RadioButton.css
R jslib/dijit/themes/soria/form/Slider.css
R jslib/dijit/themes/soria/form/Slider_rtl.css
R jslib/dijit/themes/soria/form/TimeTextBox.css
R jslib/dijit/themes/soria/images/accordionItemActive.gif
R jslib/dijit/themes/soria/images/accordionItemActive.png
R jslib/dijit/themes/soria/images/buttonActive.png
R jslib/dijit/themes/soria/images/buttonDisabled.png
R jslib/dijit/themes/soria/images/buttonEnabled.png
R jslib/dijit/themes/soria/images/buttonHover.png
R jslib/dijit/themes/soria/images/dndCopy.png
R jslib/dijit/themes/soria/images/dndMove.png
R jslib/dijit/themes/soria/images/dndNoCopy.png
R jslib/dijit/themes/soria/images/dndNoMove.png
R jslib/dijit/themes/soria/images/editor.gif
R jslib/dijit/themes/soria/images/editorDisabled.gif
R jslib/dijit/themes/soria/images/editorDisabled_rtl.gif
R jslib/dijit/themes/soria/images/editor_rtl.gif
R jslib/dijit/themes/soria/images/preciseSliderThumb.gif
R jslib/dijit/themes/soria/images/preciseSliderThumb.png
R jslib/dijit/themes/soria/images/preciseSliderThumbFocus.gif
R jslib/dijit/themes/soria/images/preciseSliderThumbFocus.png
R jslib/dijit/themes/soria/images/progressBarAnim.gif
R jslib/dijit/themes/soria/images/progressBarEmpty.png
R jslib/dijit/themes/soria/images/progressBarFull.png
R jslib/dijit/themes/soria/images/sliderEmpty.png
R jslib/dijit/themes/soria/images/sliderEmptyVertical.png
R jslib/dijit/themes/soria/images/sliderFull.png
R jslib/dijit/themes/soria/images/sliderFullFocus.png
R jslib/dijit/themes/soria/images/sliderFullVertical.png
R jslib/dijit/themes/soria/images/sliderFullVerticalFocus.png
R jslib/dijit/themes/soria/images/sliderThumb.gif
R jslib/dijit/themes/soria/images/sliderThumb.png
R jslib/dijit/themes/soria/images/sliderThumbFocus.gif
R jslib/dijit/themes/soria/images/sliderThumbFocus.png
R jslib/dijit/themes/soria/images/splitContainerSizerH-thumb.png
R jslib/dijit/themes/soria/images/splitContainerSizerH.png
R jslib/dijit/themes/soria/images/splitContainerSizerV-thumb.png
R jslib/dijit/themes/soria/images/splitContainerSizerV.png
R jslib/dijit/themes/soria/images/spriteArrows.gif
R jslib/dijit/themes/soria/images/spriteArrows.png
R jslib/dijit/themes/soria/images/spriteCheckbox.gif
R jslib/dijit/themes/soria/images/spriteCheckbox.png
R jslib/dijit/themes/soria/images/spriteDivIcons.gif
R jslib/dijit/themes/soria/images/spriteDivIcons.png
R jslib/dijit/themes/soria/images/spriteRadio.gif
R jslib/dijit/themes/soria/images/spriteRadio.png
R jslib/dijit/themes/soria/images/spriteRoundedIconsSmall.gif
R jslib/dijit/themes/soria/images/spriteRoundedIconsSmall.png
R jslib/dijit/themes/soria/images/spriteRoundedIconsSmallBl.gif
R jslib/dijit/themes/soria/images/spriteRoundedIconsSmallBl.png
R jslib/dijit/themes/soria/images/spriteTree.gif
R jslib/dijit/themes/soria/images/spriteTree.png
R jslib/dijit/themes/soria/images/spriteTree_rtl.gif
R jslib/dijit/themes/soria/images/spriteTree_rtl.png
R jslib/dijit/themes/soria/images/tabBottomActiveC.gif
R jslib/dijit/themes/soria/images/tabBottomActiveSpriteLR.gif
R jslib/dijit/themes/soria/images/tabBottomEnabledC.gif
R jslib/dijit/themes/soria/images/tabBottomEnabledSpriteLR.gif
R jslib/dijit/themes/soria/images/tabBottomHoverC.gif
R jslib/dijit/themes/soria/images/tabBottomHoverSpriteLR.gif
R jslib/dijit/themes/soria/images/tabContainerSprite.gif
R jslib/dijit/themes/soria/images/tabLeftChecked.gif
R jslib/dijit/themes/soria/images/tabRightChecked.gif
R jslib/dijit/themes/soria/images/tabStripe.gif
R jslib/dijit/themes/soria/images/tabStripeBottom.gif
R jslib/dijit/themes/soria/images/tabStripeLeft.gif
R jslib/dijit/themes/soria/images/tabStripeRight.gif
R jslib/dijit/themes/soria/images/titleBar.png
R jslib/dijit/themes/soria/images/titleBarActive.png
R jslib/dijit/themes/soria/images/tooltipConnectorDown.gif
R jslib/dijit/themes/soria/images/tooltipConnectorDown.png
R jslib/dijit/themes/soria/images/tooltipConnectorLeft.gif
R jslib/dijit/themes/soria/images/tooltipConnectorLeft.png
R jslib/dijit/themes/soria/images/tooltipConnectorRight.gif
R jslib/dijit/themes/soria/images/tooltipConnectorRight.png
R jslib/dijit/themes/soria/images/tooltipConnectorUp.gif
R jslib/dijit/themes/soria/images/tooltipConnectorUp.png
R jslib/dijit/themes/soria/images/treeExpand_loading.gif
R jslib/dijit/themes/soria/images/treeHover.png
R jslib/dijit/themes/soria/images/treeI.gif
R jslib/dijit/themes/soria/images/treeI_half.gif
R jslib/dijit/themes/soria/images/treeI_half_rtl.gif
R jslib/dijit/themes/soria/images/treeI_rtl.gif
R jslib/dijit/themes/soria/images/validationInputBg.gif
R jslib/dijit/themes/soria/images/validationInputBg.png
R jslib/dijit/themes/soria/images/warning.png
R jslib/dijit/themes/soria/layout/AccordionContainer.css
R jslib/dijit/themes/soria/layout/AccordionContainer_rtl.css
R jslib/dijit/themes/soria/layout/BorderContainer.css
R jslib/dijit/themes/soria/layout/ContentPane.css
R jslib/dijit/themes/soria/layout/SplitContainer.css
R jslib/dijit/themes/soria/layout/TabContainer.css
R jslib/dijit/themes/soria/layout/TabContainer_rtl.css
R jslib/dijit/themes/soria/soria.css
R jslib/dijit/themes/soria/soria_rtl.css
R jslib/dijit/themes/tundra/Calendar.css
R jslib/dijit/themes/tundra/Calendar_rtl.css
R jslib/dijit/themes/tundra/ColorPalette.css
R jslib/dijit/themes/tundra/Common.css
R jslib/dijit/themes/tundra/Dialog.css
R jslib/dijit/themes/tundra/Dialog_rtl.css
R jslib/dijit/themes/tundra/Editor.css
R jslib/dijit/themes/tundra/Editor_rtl.css
R jslib/dijit/themes/tundra/Menu.css
R jslib/dijit/themes/tundra/Menu_rtl.css
R jslib/dijit/themes/tundra/ProgressBar.css
R jslib/dijit/themes/tundra/TimePicker.css
R jslib/dijit/themes/tundra/TimePicker_rtl.css
R jslib/dijit/themes/tundra/TitlePane.css
R jslib/dijit/themes/tundra/TitlePane_rtl.css
R jslib/dijit/themes/tundra/Toolbar.css
R jslib/dijit/themes/tundra/Tree.css
R jslib/dijit/themes/tundra/Tree_rtl.css
R jslib/dijit/themes/tundra/form/Button.css
R jslib/dijit/themes/tundra/form/Checkbox.css
R jslib/dijit/themes/tundra/form/Common.css
R jslib/dijit/themes/tundra/form/Common_rtl.css
R jslib/dijit/themes/tundra/form/RadioButton.css
R jslib/dijit/themes/tundra/form/Select.css
R jslib/dijit/themes/tundra/form/Slider.css
R jslib/dijit/themes/tundra/form/Slider_rtl.css
R jslib/dijit/themes/tundra/images/accordionItemActive.gif
R jslib/dijit/themes/tundra/images/accordionItemHover.gif
R jslib/dijit/themes/tundra/images/buttonActive.png
R jslib/dijit/themes/tundra/images/buttonDisabled.png
R jslib/dijit/themes/tundra/images/buttonEnabled.png
R jslib/dijit/themes/tundra/images/buttonHover.png
R jslib/dijit/themes/tundra/images/calendarDayLabel.png
R jslib/dijit/themes/tundra/images/calendarMonthLabel.png
R jslib/dijit/themes/tundra/images/calendarYearLabel.png
R jslib/dijit/themes/tundra/images/checkmark.gif
R jslib/dijit/themes/tundra/images/checkmark.png
R jslib/dijit/themes/tundra/images/checkmarkNoBorder.gif
R jslib/dijit/themes/tundra/images/checkmarkNoBorder.png
R jslib/dijit/themes/tundra/images/circleIcon.gif
R jslib/dijit/themes/tundra/images/circleIcon.png
R jslib/dijit/themes/tundra/images/comboArrowDown.gif
R jslib/dijit/themes/tundra/images/dijitProgressBarAnim.gif
R jslib/dijit/themes/tundra/images/dijitProgressBarAnim.psd
R jslib/dijit/themes/tundra/images/dndCopy.png
R jslib/dijit/themes/tundra/images/dndMove.png
R jslib/dijit/themes/tundra/images/dndNoCopy.png
R jslib/dijit/themes/tundra/images/dndNoMove.png
R jslib/dijit/themes/tundra/images/dojoTundraGradientBg.gif
R jslib/dijit/themes/tundra/images/dojoTundraGradientBg.png
R jslib/dijit/themes/tundra/images/doubleArrowDown.png
R jslib/dijit/themes/tundra/images/doubleArrowUp.png
R jslib/dijit/themes/tundra/images/editor.gif
R jslib/dijit/themes/tundra/images/editorDisabled.gif
R jslib/dijit/themes/tundra/images/editorDisabled_rtl.gif
R jslib/dijit/themes/tundra/images/editor_rtl.gif
R jslib/dijit/themes/tundra/images/folderClosed.gif
R jslib/dijit/themes/tundra/images/folderOpened.gif
R jslib/dijit/themes/tundra/images/i.gif
R jslib/dijit/themes/tundra/images/i_half.gif
R jslib/dijit/themes/tundra/images/i_half_rtl.gif
R jslib/dijit/themes/tundra/images/i_rtl.gif
R jslib/dijit/themes/tundra/images/leaf.gif
R jslib/dijit/themes/tundra/images/loading.gif
R jslib/dijit/themes/tundra/images/menu.png
R jslib/dijit/themes/tundra/images/minusButton.gif
R jslib/dijit/themes/tundra/images/no.gif
R jslib/dijit/themes/tundra/images/noX.gif
R jslib/dijit/themes/tundra/images/plusButton.gif
R jslib/dijit/themes/tundra/images/popupMenuBg.gif
R jslib/dijit/themes/tundra/images/preciseSliderThumb.gif
R jslib/dijit/themes/tundra/images/preciseSliderThumb.png
R jslib/dijit/themes/tundra/images/preciseSliderThumbFocus.gif
R jslib/dijit/themes/tundra/images/preciseSliderThumbFocus.png
R jslib/dijit/themes/tundra/images/progressBarAnim-1.png
R jslib/dijit/themes/tundra/images/progressBarAnim-2.png
R jslib/dijit/themes/tundra/images/progressBarAnim-3.png
R jslib/dijit/themes/tundra/images/progressBarAnim-4.png
R jslib/dijit/themes/tundra/images/progressBarAnim-5.png
R jslib/dijit/themes/tundra/images/progressBarAnim-6.png
R jslib/dijit/themes/tundra/images/progressBarAnim-7.png
R jslib/dijit/themes/tundra/images/progressBarAnim-8.png
R jslib/dijit/themes/tundra/images/progressBarAnim-9.png
R jslib/dijit/themes/tundra/images/progressBarAnim.gif
R jslib/dijit/themes/tundra/images/progressBarAnim.psd
R jslib/dijit/themes/tundra/images/progressBarEmpty.png
R jslib/dijit/themes/tundra/images/progressBarFull.png
R jslib/dijit/themes/tundra/images/radioButtonActive.png
R jslib/dijit/themes/tundra/images/radioButtonActiveDisabled.png
R jslib/dijit/themes/tundra/images/radioButtonActiveHover.png
R jslib/dijit/themes/tundra/images/radioButtonDisabled.png
R jslib/dijit/themes/tundra/images/radioButtonEnabled.png
R jslib/dijit/themes/tundra/images/radioButtonHover.png
R jslib/dijit/themes/tundra/images/sliderEmpty.png
R jslib/dijit/themes/tundra/images/sliderEmptyVertical.png
R jslib/dijit/themes/tundra/images/sliderFull.png
R jslib/dijit/themes/tundra/images/sliderFullFocus.png
R jslib/dijit/themes/tundra/images/sliderFullVertical.png
R jslib/dijit/themes/tundra/images/sliderFullVerticalFocus.png
R jslib/dijit/themes/tundra/images/sliderThumb.png
R jslib/dijit/themes/tundra/images/sliderThumbFocus.gif
R jslib/dijit/themes/tundra/images/sliderThumbFocus.png
R jslib/dijit/themes/tundra/images/smallArrowDown.png
R jslib/dijit/themes/tundra/images/smallArrowUp.png
R jslib/dijit/themes/tundra/images/splitContainerSizerH-thumb.png
R jslib/dijit/themes/tundra/images/splitContainerSizerH.png
R jslib/dijit/themes/tundra/images/splitContainerSizerV-thumb.png
R jslib/dijit/themes/tundra/images/splitContainerSizerV.png
R jslib/dijit/themes/tundra/images/spriteArrows.gif
R jslib/dijit/themes/tundra/images/spriteArrows.png
R jslib/dijit/themes/tundra/images/spriteRoundedIconsSmall.gif
R jslib/dijit/themes/tundra/images/spriteRoundedIconsSmall.png
R jslib/dijit/themes/tundra/images/tabActive.png
R jslib/dijit/themes/tundra/images/tabClose.gif
R jslib/dijit/themes/tundra/images/tabClose.png
R jslib/dijit/themes/tundra/images/tabCloseHover.gif
R jslib/dijit/themes/tundra/images/tabCloseHover.png
R jslib/dijit/themes/tundra/images/tabDisabled.png
R jslib/dijit/themes/tundra/images/tabEnabled.png
R jslib/dijit/themes/tundra/images/tabHover.gif
R jslib/dijit/themes/tundra/images/tabHover.png
R jslib/dijit/themes/tundra/images/titleBar.png
R jslib/dijit/themes/tundra/images/titleBarBg.gif
R jslib/dijit/themes/tundra/images/tooltipConnectorDown.gif
R jslib/dijit/themes/tundra/images/tooltipConnectorDown.png
R jslib/dijit/themes/tundra/images/tooltipConnectorLeft.gif
R jslib/dijit/themes/tundra/images/tooltipConnectorLeft.png
R jslib/dijit/themes/tundra/images/tooltipConnectorRight.gif
R jslib/dijit/themes/tundra/images/tooltipConnectorRight.png
R jslib/dijit/themes/tundra/images/tooltipConnectorUp.gif
R jslib/dijit/themes/tundra/images/tooltipConnectorUp.png
R jslib/dijit/themes/tundra/images/treeExpand_leaf.gif
R jslib/dijit/themes/tundra/images/treeExpand_leaf_rtl.gif
R jslib/dijit/themes/tundra/images/treeExpand_loading.gif
R jslib/dijit/themes/tundra/images/treeExpand_minus.gif
R jslib/dijit/themes/tundra/images/treeExpand_minus_rtl.gif
R jslib/dijit/themes/tundra/images/treeExpand_mius.gif
R jslib/dijit/themes/tundra/images/treeExpand_plus.gif
R jslib/dijit/themes/tundra/images/treeExpand_plus_rtl.gif
R jslib/dijit/themes/tundra/images/treeHover.png
R jslib/dijit/themes/tundra/images/validationInputBg.gif
R jslib/dijit/themes/tundra/images/validationInputBg.png
R jslib/dijit/themes/tundra/images/warning.png
R jslib/dijit/themes/tundra/layout/AccordionContainer.css
R jslib/dijit/themes/tundra/layout/BorderContainer.css
R jslib/dijit/themes/tundra/layout/ContentPane.css
R jslib/dijit/themes/tundra/layout/SplitContainer.css
R jslib/dijit/themes/tundra/layout/TabContainer.css
R jslib/dijit/themes/tundra/layout/TabContainer_rtl.css
R jslib/dijit/themes/tundra/tundra.css
R jslib/dijit/themes/tundra/tundra_rtl.css
R jslib/dojo/AdapterRegistry.js
R jslib/dojo/_firebug/LICENSE
R jslib/dojo/_firebug/errorIcon.png
R jslib/dojo/_firebug/firebug.css
R jslib/dojo/_firebug/firebug.js
R jslib/dojo/_firebug/infoIcon.png
R jslib/dojo/_firebug/tab_lft_norm.png
R jslib/dojo/_firebug/tab_lft_over.png
R jslib/dojo/_firebug/tab_rgt_norm.png
R jslib/dojo/_firebug/tab_rgt_over.png
R jslib/dojo/_firebug/warningIcon.png
R jslib/dojo/cache.js
R jslib/dojo/data/util/filter.js
R jslib/dojo/data/util/simpleFetch.js
R jslib/dojo/data/util/sorter.js
R jslib/dojo/date/locale.js
R jslib/dojo/date/stamp.js
R jslib/dojo/dojo.js
R jslib/dojo/dojo.js.uncompressed.js
R jslib/dojo/i18n.js
R jslib/dojo/jbrowse_dojo.js
R jslib/dojo/jbrowse_dojo.js.uncompressed.js
R jslib/dojo/jbrowse_dojo_faceted_tracksel.js
R jslib/dojo/jbrowse_dojo_faceted_tracksel.js.uncompressed.js
R jslib/dojo/nls/ar/colors.js
R jslib/dojo/nls/ca/colors.js
R jslib/dojo/nls/colors.js
R jslib/dojo/nls/cs/colors.js
R jslib/dojo/nls/da/colors.js
R jslib/dojo/nls/de/colors.js
R jslib/dojo/nls/el/colors.js
R jslib/dojo/nls/es/colors.js
R jslib/dojo/nls/fi/colors.js
R jslib/dojo/nls/fr/colors.js
R jslib/dojo/nls/he/colors.js
R jslib/dojo/nls/hu/colors.js
R jslib/dojo/nls/it/colors.js
R jslib/dojo/nls/ja/colors.js
R jslib/dojo/nls/jbrowse_dojo_ROOT.js
R jslib/dojo/nls/jbrowse_dojo_ar.js
R jslib/dojo/nls/jbrowse_dojo_ca.js
R jslib/dojo/nls/jbrowse_dojo_cs.js
R jslib/dojo/nls/jbrowse_dojo_da.js
R jslib/dojo/nls/jbrowse_dojo_de-de.js
R jslib/dojo/nls/jbrowse_dojo_de.js
R jslib/dojo/nls/jbrowse_dojo_el.js
R jslib/dojo/nls/jbrowse_dojo_en-gb.js
R jslib/dojo/nls/jbrowse_dojo_en-us.js
R jslib/dojo/nls/jbrowse_dojo_en.js
R jslib/dojo/nls/jbrowse_dojo_es-es.js
R jslib/dojo/nls/jbrowse_dojo_es.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ROOT.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ar.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ca.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_cs.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_da.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_de-de.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_de.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_el.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_en-gb.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_en-us.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_en.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_es-es.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_es.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_fi-fi.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_fi.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_fr-fr.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_fr.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_he-il.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_he.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_hu.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_it-it.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_it.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ja-jp.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ja.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ko-kr.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ko.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_nb.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_nl-nl.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_nl.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_pl.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_pt-br.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_pt-pt.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_pt.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_ru.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_sk.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_sl.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_sv.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_th.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_tr.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_xx.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_zh-cn.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_zh-tw.js
R jslib/dojo/nls/jbrowse_dojo_faceted_tracksel_zh.js
R jslib/dojo/nls/jbrowse_dojo_fi-fi.js
R jslib/dojo/nls/jbrowse_dojo_fi.js
R jslib/dojo/nls/jbrowse_dojo_fr-fr.js
R jslib/dojo/nls/jbrowse_dojo_fr.js
R jslib/dojo/nls/jbrowse_dojo_he-il.js
R jslib/dojo/nls/jbrowse_dojo_he.js
R jslib/dojo/nls/jbrowse_dojo_hu.js
R jslib/dojo/nls/jbrowse_dojo_it-it.js
R jslib/dojo/nls/jbrowse_dojo_it.js
R jslib/dojo/nls/jbrowse_dojo_ja-jp.js
R jslib/dojo/nls/jbrowse_dojo_ja.js
R jslib/dojo/nls/jbrowse_dojo_ko-kr.js
R jslib/dojo/nls/jbrowse_dojo_ko.js
R jslib/dojo/nls/jbrowse_dojo_nb.js
R jslib/dojo/nls/jbrowse_dojo_nl-nl.js
R jslib/dojo/nls/jbrowse_dojo_nl.js
R jslib/dojo/nls/jbrowse_dojo_no.js
R jslib/dojo/nls/jbrowse_dojo_pl.js
R jslib/dojo/nls/jbrowse_dojo_pt-br.js
R jslib/dojo/nls/jbrowse_dojo_pt-pt.js
R jslib/dojo/nls/jbrowse_dojo_pt.js
R jslib/dojo/nls/jbrowse_dojo_ru.js
R jslib/dojo/nls/jbrowse_dojo_sk.js
R jslib/dojo/nls/jbrowse_dojo_sl.js
R jslib/dojo/nls/jbrowse_dojo_sv.js
R jslib/dojo/nls/jbrowse_dojo_th.js
R jslib/dojo/nls/jbrowse_dojo_tr.js
R jslib/dojo/nls/jbrowse_dojo_xx.js
R jslib/dojo/nls/jbrowse_dojo_zh-cn.js
R jslib/dojo/nls/jbrowse_dojo_zh-tw.js
R jslib/dojo/nls/jbrowse_dojo_zh.js
R jslib/dojo/nls/kk/colors.js
R jslib/dojo/nls/ko/colors.js
R jslib/dojo/nls/nb/colors.js
R jslib/dojo/nls/nl/colors.js
R jslib/dojo/nls/pl/colors.js
R jslib/dojo/nls/pt-pt/colors.js
R jslib/dojo/nls/pt/colors.js
R jslib/dojo/nls/ro/colors.js
R jslib/dojo/nls/ru/colors.js
R jslib/dojo/nls/sk/colors.js
R jslib/dojo/nls/sl/colors.js
R jslib/dojo/nls/sv/colors.js
R jslib/dojo/nls/th/colors.js
R jslib/dojo/nls/tr/colors.js
R jslib/dojo/nls/zh-tw/colors.js
R jslib/dojo/nls/zh/colors.js
R jslib/dojo/parser.js
R jslib/dojo/resources/LICENSE
R jslib/dojo/resources/_modules.js
R jslib/dojo/resources/blank.gif
R jslib/dojo/resources/blank.html
R jslib/dojo/resources/dnd.css
R jslib/dojo/resources/dojo.css
R jslib/dojo/resources/iframe_history.html
R jslib/dojo/resources/images/dndCopy.png
R jslib/dojo/resources/images/dndMove.png
R jslib/dojo/resources/images/dndNoCopy.png
R jslib/dojo/resources/images/dndNoMove.png
R jslib/dojo/string.js
R jslib/dojox/grid/resources/Expando.html
R jslib/dojox/grid/resources/Grid.css
R jslib/dojox/grid/resources/Grid_rtl.css
R jslib/dojox/grid/resources/View.html
R jslib/dojox/grid/resources/_Grid.html
R jslib/dojox/grid/resources/claroGrid.css
R jslib/dojox/grid/resources/images/grid_dx_gradient.gif
R jslib/dojox/grid/resources/images/grid_sort_down.gif
R jslib/dojox/grid/resources/images/grid_sort_up.gif
R jslib/dojox/grid/resources/images/header.png
R jslib/dojox/grid/resources/images/header_shadow.png
R jslib/dojox/grid/resources/images/row_back.png
R jslib/dojox/grid/resources/images/tabEnabled_rotated.png
R jslib/dojox/grid/resources/images/tabHover_rotated.png
R jslib/dojox/grid/resources/images/td_button_down.png
R jslib/dojox/grid/resources/nihiloGrid.css
R jslib/dojox/grid/resources/soriaGrid.css
R jslib/dojox/grid/resources/tundraGrid.css
R js/Animation.js
R js/ArrayRepr.js
R js/BehaviorManager.js
R js/Browser.js
R js/GenomeView.js
R js/Layout.js
R js/LazyArray.js
R js/Model/AutocompleteStore.js
R js/Model/TrackMetaData.js
R js/Model/modEncodeTrackMetadata.js
R js/NCList.js
R js/NCList_v0.js
R js/Ruler.js
R js/SeqFeatureStore.js
R js/SeqFeatureStore/NCList.js
R js/SeqFeatureStore/NCList_v0.js
R js/SequenceStore/StaticChunked.js
R js/Slider.js
R js/Store.js
R js/TiledImageStore/Fixed.js
R js/TiledImageStore/Fixed_v0.js
R js/View/Track/YScaleMixin.js
R js/View/TrackList/Faceted.js
R js/View/TrackList/Null.js
R js/View/TrackList/Simple.js
R js/Zoomer.js
R js/touchJBrowse.js
R jslib/jbrowse_dojo.profile.js
R jslib/jbrowse_dojo_build.sh
R jslib/jsdoc_toolkit-2.4.0/README.txt
R jslib/jsdoc_toolkit-2.4.0/app/frame.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Chain.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Dumper.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Hash.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Link.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Namespace.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Opt.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Reflection.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/String.js
R jslib/jsdoc_toolkit-2.4.0/app/frame/Testrun.js
R jslib/jsdoc_toolkit-2.4.0/app/handlers/FOODOC.js
R jslib/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC.js
R jslib/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/DomReader.js
R jslib/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/XMLDoc.js
R jslib/jsdoc_toolkit-2.4.0/app/handlers/XMLDOC/XMLParse.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/DocComment.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/DocTag.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/JsDoc.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/JsPlate.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Lang.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Parser.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/PluginManager.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Symbol.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/SymbolSet.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TextStream.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Token.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TokenReader.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/TokenStream.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Util.js
R jslib/jsdoc_toolkit-2.4.0/app/lib/JSDOC/Walker.js
R jslib/jsdoc_toolkit-2.4.0/app/main.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/commentSrcJson.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/frameworkPrototype.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/functionCall.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/publishSrcHilite.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/symbolLink.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/tagParamConfig.js
R jslib/jsdoc_toolkit-2.4.0/app/plugins/tagSynonyms.js
R jslib/jsdoc_toolkit-2.4.0/app/run.js
R jslib/jsdoc_toolkit-2.4.0/app/t/TestDoc.js
R jslib/jsdoc_toolkit-2.4.0/app/t/runner.js
R jslib/jsdoc_toolkit-2.4.0/app/test.js
R jslib/jsdoc_toolkit-2.4.0/app/test/addon.js
R jslib/jsdoc_toolkit-2.4.0/app/test/anon_inner.js
R jslib/jsdoc_toolkit-2.4.0/app/test/augments.js
R jslib/jsdoc_toolkit-2.4.0/app/test/augments2.js
R jslib/jsdoc_toolkit-2.4.0/app/test/borrows.js
R jslib/jsdoc_toolkit-2.4.0/app/test/borrows2.js
R jslib/jsdoc_toolkit-2.4.0/app/test/config.js
R jslib/jsdoc_toolkit-2.4.0/app/test/constructs.js
R jslib/jsdoc_toolkit-2.4.0/app/test/encoding.js
R jslib/jsdoc_toolkit-2.4.0/app/test/encoding_other.js
R jslib/jsdoc_toolkit-2.4.0/app/test/event.js
R jslib/jsdoc_toolkit-2.4.0/app/test/exports.js
R jslib/jsdoc_toolkit-2.4.0/app/test/functions_anon.js
R jslib/jsdoc_toolkit-2.4.0/app/test/functions_nested.js
R jslib/jsdoc_toolkit-2.4.0/app/test/global.js
R jslib/jsdoc_toolkit-2.4.0/app/test/globals.js
R jslib/jsdoc_toolkit-2.4.0/app/test/ignore.js
R jslib/jsdoc_toolkit-2.4.0/app/test/inner.js
R jslib/jsdoc_toolkit-2.4.0/app/test/jsdoc_test.js
R jslib/jsdoc_toolkit-2.4.0/app/test/lend.js
R jslib/jsdoc_toolkit-2.4.0/app/test/memberof.js
R jslib/jsdoc_toolkit-2.4.0/app/test/memberof2.js
R jslib/jsdoc_toolkit-2.4.0/app/test/memberof3.js
R jslib/jsdoc_toolkit-2.4.0/app/test/memberof_constructor.js
R jslib/jsdoc_toolkit-2.4.0/app/test/module.js
R jslib/jsdoc_toolkit-2.4.0/app/test/multi_methods.js
R jslib/jsdoc_toolkit-2.4.0/app/test/name.js
R jslib/jsdoc_toolkit-2.4.0/app/test/namespace_nested.js
R jslib/jsdoc_toolkit-2.4.0/app/test/nocode.js
R jslib/jsdoc_toolkit-2.4.0/app/test/oblit_anon.js
R jslib/jsdoc_toolkit-2.4.0/app/test/overview.js
R jslib/jsdoc_toolkit-2.4.0/app/test/param_inline.js
R jslib/jsdoc_toolkit-2.4.0/app/test/params_optional.js
R jslib/jsdoc_toolkit-2.4.0/app/test/prototype.js
R jslib/jsdoc_toolkit-2.4.0/app/test/prototype_nested.js
R jslib/jsdoc_toolkit-2.4.0/app/test/prototype_oblit.js
R jslib/jsdoc_toolkit-2.4.0/app/test/prototype_oblit_constructor.js
R jslib/jsdoc_toolkit-2.4.0/app/test/public.js
R jslib/jsdoc_toolkit-2.4.0/app/test/scripts/code.js
R jslib/jsdoc_toolkit-2.4.0/app/test/scripts/notcode.txt
R jslib/jsdoc_toolkit-2.4.0/app/test/shared.js
R jslib/jsdoc_toolkit-2.4.0/app/test/shared2.js
R jslib/jsdoc_toolkit-2.4.0/app/test/shortcuts.js
R jslib/jsdoc_toolkit-2.4.0/app/test/static_this.js
R jslib/jsdoc_toolkit-2.4.0/app/test/synonyms.js
R jslib/jsdoc_toolkit-2.4.0/app/test/tosource.js
R jslib/jsdoc_toolkit-2.4.0/app/test/variable_redefine.js
R jslib/jsdoc_toolkit-2.4.0/changes.txt
R jslib/jsdoc_toolkit-2.4.0/conf/sample.conf
R jslib/jsdoc_toolkit-2.4.0/java/build.xml
R jslib/jsdoc_toolkit-2.4.0/java/build_1.4.xml
R jslib/jsdoc_toolkit-2.4.0/java/classes/js.jar
R jslib/jsdoc_toolkit-2.4.0/java/src/JsDebugRun.java
R jslib/jsdoc_toolkit-2.4.0/java/src/JsRun.java
R jslib/jsdoc_toolkit-2.4.0/jsdebug.jar
R jslib/jsdoc_toolkit-2.4.0/jsrun.jar
R jslib/jsdoc_toolkit-2.4.0/jsrun.sh
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/allclasses.tmpl
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/allfiles.tmpl
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/class.tmpl
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/index.tmpl
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/publish.js
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/static/default.css
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/static/header.html
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/static/index.html
R jslib/jsdoc_toolkit-2.4.0/templates/jsdoc/symbol.tmpl
R lib/ArrayRepr.pm
R lib/Bio/FeatureIO/bed.pm
R lib/Bio/JBrowse/Cmd.pm
R lib/Bio/JBrowse/Cmd/BioDBToJson.pm
R lib/Bio/JBrowse/Cmd/FlatFileToJson.pm
R lib/Bio/JBrowse/Cmd/NCFormatter.pm
R lib/Bio/JBrowse/Cmd/RemoveTrack.pm
R lib/Bio/JBrowse/FeatureStream.pm
R lib/Bio/JBrowse/FeatureStream/BioPerl.pm
R lib/Bio/JBrowse/FeatureStream/GFF3_LowLevel.pm
R lib/ExternalSorter.pm
R lib/FastaDatabase.pm
R lib/FeatureTrack.pm
R lib/GenomeDB.pm
R lib/ImageTrack.pm
R lib/ImageTrackRenderer.pm
R lib/IntervalStore.pm
R lib/JBlibs.pm
R lib/JsonFileStorage.pm
R lib/JsonGenerator.pm
R lib/LazyNCList.pm
R lib/LazyPatricia.pm
R lib/NCLSorter.pm
R lib/NCList.pm
R lib/NameHandler.pm
R lib/TiledImage.pm
R lib/TiledImage/DBPrimStorage.pm
R lib/TiledImage/MemoryPrimStorage.pm
R lib/TiledImage/demo-tiledimage.pl
R lib/TiledImage/gdtile.sql
R lib/TrackImage.pm
R t
M .gitmodules
M Makefile.deploy
M bin/bam-to-json.pl
M bin/biodb-to-json.pl
M bin/draw-basepair-track.pl
M bin/flatfile-to-json.pl
M bin/generate-names.pl
M bin/prepare-refseqs.pl
M bin/remove-track.pl
M bin/ucsc-to-json.pl
M bin/wig-to-json.pl
M compat_121.html
M faceted_track_selector.css
M genome.css
M index.html
M js/Store/BigWig.js
M main.css

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