Changeset [aa1a68bfef7957647e515ec694c4f6157f571549] by Robert Buels
Revision aa1a68bfef7957647e515ec694c4f6157f571549,
committed by Robert Buels
· April 12th, 2013 @ 01:19 PM
add a method to the Browser object for regularizing reference
sequence names, making them case-insensitive, and also insensitive
to variations in "chr/chrom/chromosome" and so forth. fixes
#239
https://github.com/GMOD/jbrowse/commit/aa1a68bfef7957647e515ec694c4...
11 changed files
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tests/js_tests/spec/RegularizeRefSeqs.spec.js -
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src/JBrowse/Browser.js -
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src/JBrowse/GenomeView.js -
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src/JBrowse/Model/TabixIndex.js -
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src/JBrowse/Store/SeqFeature/BAM.js -
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src/JBrowse/Store/SeqFeature/BAM/File.js -
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src/JBrowse/Store/SeqFeature/BigWig.js -
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src/JBrowse/Store/SeqFeature/VCFTabix.js -
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src/JBrowse/Store/TabixIndexedFile.js -
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tests/js_tests/index.html -
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tests/js_tests/spec/BAM.spec.js