Changesets - JBrowse - jbrowse

List changesets

Add renderAlignment option https://gi... was committed by Colin
Friday Aug 05

Commit [11261208ac85a9230a7fc31a4628aff7d85b2249]
Passing all tests https://github.com/... was committed by Colin 12:06 AM
Commit [657590b553ee01f5fe1c856b833403338b74beae]
Use mismatch https://github.com/GMOD/... was committed by Colin
Thursday Aug 04

Commit [aa33611ba129a6f65ef513cd69a856a97cc5c7cc]
Add long read test https://github.com... was committed by Colin 05:44 PM
Commit [5338449cd852e2b7a43a4250f76c4b53fce8bff9]
Fixup deletions https://github.com/GM... was committed by Colin 04:22 PM
Commit [703d8b9e19431129bf3c83965290b3002d39f3e0]
Postprocess insertion/deletion https:... was committed by Colin 04:03 PM
Commit [b619f9ccdb5f67b9da9632fc9bf44b2ee353fc7a]
Change deletion data to use sam2pairw... was committed by Colin
Wednesday Aug 03

Commit [d51cb942f779030080882efcd75d3f730178b43b]
Readjust again https://github.com/GMO... was committed by Colin 06:11 PM
Commit [5df665809bda677c0a2f79f3318b67b73865a8f5]
Readjust if deletion occurs, produce ... was committed by Colin 05:55 PM
Commit [ad79b6004f1744d73fb299a2a635420868bcd7f0]
Fix sequence track https://github.com... was committed by Colin 01:22 PM
Commit [97aa01e297ffea75db159b6a6f092b830efb86c5]
Fix sequence track https://github.com... was committed by Colin 11:07 AM
Commit [7ab5af702840159581afb3b44f1396e307cd8a75]
Use jbrowse class on CSS https://gith... was committed by Colin 09:39 AM
Commit [d01d525df6877a4210cc96bd2941a9e325d3cdc8]
src/Rotunda/View/Track/Stacked/RefSeq... was committed by Ian Holmes
Monday Aug 01

Commit [4d5b8f87cf5fb3ce9db447c0f62a96c27843065c]
Cleanup https://github.com/GMOD/jbrow... was committed by Colin 11:58 AM
Commit [d7124430479ab2bf7a5f73f8782b697fe046349e]
Cleanup https://github.com/GMOD/jbrow... was committed by Colin 11:57 AM
Commit [2655c6e5ae3b0e1fe837caef3fdb5c42b7bd0602]
Cleanup https://github.com/GMOD/jbrow... was committed by Colin 11:56 AM
Commit [6ac5599808f313fba8e0f4dbc640e4bfb962f2ae]
Fixup deletion handler test case by p... was committed by Colin 11:31 AM
Commit [150fcb3c0592c12a71791d5e7cfa216f69927a4e]
Add md deletion token https://github.... was committed by Colin 10:17 AM
Commit [d6ccf2909736cd2481e399afb873d15189a6dcd2]
Regularize bam dialog mismatches http... was committed by Colin 10:17 AM
Commit [0221688856b71483efb915af97012d800c240d43]
Fix typo https://github.com/GMOD/jbro... was committed by Colin 10:17 AM
Commit [835407bd0a0f85a26f36b469065f3f0930ff89b7]
Get deletion sequence from refseq htt... was committed by Colin 10:17 AM
Commit [1ab4896086c60a55da39daefe43cb3b9e654e612]
Add md deletion token https://github.... was committed by Colin 10:17 AM
Commit [62f91612bc4aec557f7882838204f27589100e0a]
Add md deletion token https://github.... was committed by Colin 10:15 AM
Commit [d221cbf4343bb7f2cccf23f445a584d8843ce6db]
Add md deletion token https://github.... was committed by Colin 10:12 AM
Commit [ba37e9810e0dccdeef3800950266ecd3e3117f75]
fixed Histogram overflow https://gith... was committed by Ian Holmes
Sunday Jul 31

Commit [929a56af4ad26482e56834fa5f0dad808101801f]
Prevent multiple Rotunda redraws duri... was committed by Ian Holmes
Saturday Jul 30

Commit [399c59a959f140b2d27c62eea86de7ab145ae12c]
Fixed missing features for some SeqFe... was committed by Ian Holmes 11:19 PM
Commit [79c30ae60274d8156852f1f71ff82fcbc5ed8cda]
Fixed double-redraw bug for unknown n... was committed by Ian Holmes 11:06 PM
Commit [c1cb55202e70c35831c32d13d9ac1940060de133]
Fixed Histogram.basesPerBin https://g... was committed by Ian Holmes 06:42 PM
Commit [f0d02b8d686c3a066edd9ce347b130e837d9f662]
Fixed error when no tracks displayed ... was committed by Ian Holmes 06:01 PM
Commit [47d4b32e6e969335072a6281a3ec83b5f7869b2c]
Close buttons on Rotunda track labels... was committed by Ian Holmes 05:57 PM
Commit [a2a76c3b8ff97fdb7ce966c1f0e67e78a96b5088]
Slightly less kludgy way of preventin... was committed by Ian Holmes 04:14 PM
Commit [2d693b58b143ad5f554dc486fdd22c35ba670af2]
Make the start of chromosome work in ... was committed by Colin 12:54 PM
Commit [bd84201158f7b84dcb9de3f47835d68ebfec891f]
Regularize bam dialog mismatches http... was committed by Colin 09:36 AM
Commit [231ef74e9e68ab40a171815f33519b5acf34cbf2]
fixed dragEnd bug in Rotunda https://... was committed by Ian Holmes
Friday Jul 29

Commit [438839c3d6c7c76d674cc924c3596eb5f2555a1d]
Rotunda track labels match Browser tr... was committed by Ian Holmes 06:26 PM
Commit [6db270186eda216d85e9e6764fab7ac97ec6b1e5]
Changing track order in Rotunda chang... was committed by Ian Holmes 06:20 PM
Commit [2739a42ed33b8ab79d49f16e3541a13bf5793d9a]
Rotunda ruler = Browser refseq track ... was committed by Ian Holmes 01:38 PM
Commit [083436d8722dda1ff26376c282acd53a254ffe97]
Zoom out for long refseqs https://git... was committed by Ian Holmes 01:32 PM
Commit [0b1638f128ad58c9da521321505fcd3ea2559ce5]
Switch between linear & circular view... was committed by Ian Holmes 01:27 PM
Commit [6628fa638164ae87c7fce23eb0edaee156d8c15b]
Switch between linear & circular view... was committed by Ian Holmes 01:21 PM
Commit [81c255a4b70ec7baf782c0adc8fd0e72fcf3e3d9]
GenomeView<->Rotunda communication vi... was committed by Ian Holmes 11:38 AM
Commit [9fb65d7c47a32cfe93faa0bd15e7aecec875fa86]
navigation events (in progress) https... was committed by Ian Holmes
Thursday Jul 28

Commit [196ceea8ab1af424822009704710c3dc5c6114aa]
navigation events (in progress) https... was committed by Ian Holmes 06:11 PM
Commit [79916010e459273246ebec1feee255542b070dd8]
XYplot tracks work in Rotunda, albeit... was committed by Ian Holmes 02:18 PM
Commit [61b369d57a74169ceeb17ef67247c3ec405ccbb3]
comments https://github.com/GMOD/jbro... was committed by Ian Holmes 11:29 AM
Commit [7b9c095ccc5cab362b2be8ace80b903a00317235]
show/hide Rotunda tracks https://gith... was committed by Ian Holmes
Wednesday Jul 27

Commit [bad42062e761c0f8e1decba1f3d37187f8603f3d]
histograms for all tracks https://git... was committed by Ian Holmes 06:49 PM
Commit [2f7dad032f366d2913956bb1210de03d8663508d]
Colored feature density histogram htt... was committed by Ian Holmes 05:43 PM
Commit [ef90646da8e216bcbe5ae29950ab182d2a3332d0]
src/Rotunda/View/Track/Histogram/Feat... was committed by Ian Holmes 04:58 PM
Commit [384458a13c3fab78be223a7a8fc1d7b6abcc9030]
Add list of plugins https://github.co... was committed by Colin 03:54 PM
Commit [60ad5f5ea658c1a184c597bb3279d5c321aeea7d]
refactoring store/track interface htt... was committed by Ian Holmes 02:05 PM
Commit [d8de894017af50887fc00cffad56834a40fef604]
suppress some console messages when t... was committed by Ian Holmes 12:27 PM
Commit [e70c94f6d1ecf8445a00eb832f2cd51d552290b4]
Make the track labels not re-appear o... was committed by Colin 10:31 AM
Commit [e4aeb93ad5c192a2a4993690be9fd6bb84cb660f]
Make the track labels not re-appear o... was committed by Colin 10:25 AM
Commit [2d8616d5b66e609c6a3efec93b8b07521113fb0f]
hacking cssColor https://github.com/G... was committed by Ian Holmes
Tuesday Jul 26

Commit [6fce12ba76f832fef21b752ddfd6ede64ff3f46e]
workingbetter https://github.com/GMOD... was committed by Ian Holmes 05:22 PM
Commit [8e31bd31a697b19739e0c44c2e53133caf9f39bb]
working https://github.com/GMOD/jbrow... was committed by Ian Holmes 05:00 PM
Commit [e67598fbe2ee1306073e642a119903a2a38463cf]
getting there https://github.com/GMOD... was committed by Ian Holmes 04:01 PM
Commit [d5b4383e16943be17f6e7db4f28cffb89c989429]
Modular css https://github.com/GMOD/j... was committed by Colin 10:44 AM
Commit [90e8ee22b3db2ff4f64e3ef9b0d9b2fad45b9818]

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