Changesets - JBrowse - jbrowse

List changesets

Refactor _storeCache to allow multipl... was committed by Ian Holmes
Monday Jul 25

Commit [ab724d085b4163523141baa9c7ae97384ad6b746]
Autocreate Rotunda ruler from Refseqs... was committed by Ian Holmes 03:04 PM
Commit [ad6ba2287ba5e558893312f02634c6340985718c]
Autocreate Rotunda ruler from Refseqs... was committed by Ian Holmes 02:59 PM
Commit [e58878e042b23d81c5f98daf6c98a224c7a6ce52]
src/Rotunda/View/Track/Stacked.js htt... was committed by Ian Holmes 02:35 PM
Commit [0fa407c6f6fd7e0e066119587c3d979bfa0a121c]
Remove debug logging https://github.c... was committed by Colin 12:32 PM
Commit [5ed7f4f29b7e432a044e92f52b73473dba06d234]
Fix arraybuffer slice for old phantom... was committed by Colin 12:32 PM
Commit [dc699b4c5153d20064130472150536e325869f16]
Fix loading twobit in browser https:/... was committed by Colin 12:32 PM
Commit [14f6a7c94d6353336d611f6ecfeada2d138a92b6]
Fix jasmine test for 2bit https://git... was committed by Colin 12:32 PM
Commit [dcfb8a26ffe53b653cf71c77b0a9c1c8105c0d94]
Touchup 2bit support https://github.c... was committed by Colin 12:32 PM
Commit [ab80ded7b5ccd5c036ceb664ea64487a216675c7]
Added additional .2bit selenium tests... was committed by Daniel Kasenberg 12:32 PM
Commit [fe1f3871b8381e07f162a54552b07842b9bbd2b8]
Modified .2bit store when refseq not ... was committed by Daniel Kasenberg 12:32 PM
Commit [bb6636b960903b05ceed13ba425f596718668ab7]
Removed hardwiring of data URL in Two... was committed by Daniel Kasenberg 12:31 PM
Commit [1917cfbc1b0085d69717be31d01d140dc0ceb239]
Redesigned .2bit store to lazily get ... was committed by Daniel Kasenberg 12:31 PM
Commit [4ad42a6cd0cfbd0f003b52e8f15fe1c318e5be12]
Got .2bit refseq support up and runni... was committed by Daniel Kasenberg 12:31 PM
Commit [71b956cdb68fa5741374c38ce18a3e1fdfe239bd]
TwoBit file reader now cuts sequence ... was committed by Daniel Kasenberg 12:31 PM
Commit [5b86c86cc6709c778acd6892ac31a553e9c62b55]
Added masking to .2bit reader store h... was committed by Daniel Kasenberg 12:31 PM
Commit [73aa9f9aee8bdd88f91f70333efd14ffce9d712e]
Began .2bit sequence loading https://... was committed by Daniel Kasenberg 12:31 PM
Commit [0a0ccd2d7f43f8021ebd28b71e311625c45fc454]
Implemented .2bit file reading of hea... was committed by Daniel Kasenberg 12:31 PM
Commit [20f97c98b4e5e8bd7070b930e326a2bc11a5fb91]
Changing 2bit file support system to ... was committed by Daniel Kasenberg 12:31 PM
Commit [ce74588bca41a22b500a7a1205e42a21c555c1a9]
Early beginnings of .2bit reference s... was committed by Daniel Kasenberg 12:31 PM
Commit [72e1dff480b292bce650d7e115018479126ee676]
Fix typo https://github.com/GMOD/jbro... was committed by Colin 09:23 AM
Commit [509630a584e060af664bb77d8a85a0f2c9225427]
Get deletion sequence from refseq htt... was committed by Colin 08:40 AM
Commit [661aaf6eb0530e3aa26ccc7678f6e05802899995]
Get deletion sequence from refseq htt... was committed by Colin 08:29 AM
Commit [c04417a10d926d58aa83bb06309a5026ea91c88c]
Show dialog after setting content htt... was committed by Colin 08:29 AM
Commit [a1c18d78d6b354c8c8dcc01aa5f4dd0e78a2a608]
Merge pull request #792 from keiranmr... was committed by Colin Diesh 07:54 AM
Commit [58eabfae8789e2c7c3d9e4cc7b55574dfcb8a3cb]
Adds a simulated large deletion for t... was committed by Keiran M Raine 06:35 AM
Commit [e5f732e4fa3119e2e6dac89a6253b16c969f4d05]
client[XY] -> layer[XY] https://githu... was committed by Ian Holmes
Wednesday Jul 20

Commit [1ba0e2b7631d52e671adc72029c760e0072a7faa]
hookup jbrowse nav buttons https://gi... was committed by Ian Holmes 09:58 AM
Commit [10aab71d650deec4de04050f683af986538da2ec]
Rotunda in place of GenomeView https:... was committed by Ian Holmes
Tuesday Jul 19

Commit [7309d2c84bf320310b89dc333ef2886c0b3a7873]
tests https://github.com/GMOD/jbrowse... was committed by Ian Holmes 02:54 PM
Commit [b28c4feb8096b000b84153a232b09c9358cfed9e]
nesting https://github.com/GMOD/jbrow... was committed by Ian Holmes 02:43 PM
Commit [0c0736bcc554a1371f766b34e44b18d2c6adf99b]
slightly more tasteful 'Hide track la... was committed by Ian Holmes 10:34 AM
Commit [d4008c058854fb584edef9f344ca1a10599a876d]
slightly more tasteful 'Hide track la... was committed by Ian Holmes 10:33 AM
Commit [f2c94f4995a542642b89660f4555da75d020a3ea]
added link to rotunda.css https://git... was committed by Ian Holmes 12:21 AM
Commit [9754e67686d865c16638d5e53f4ab127e2c1482c]
Load rotunda with jbrowse wrapper htt... was committed by Ian Holmes
Monday Jul 18

Commit [31cb19eb85173fe5770e71fc075e7adca98dc866]
initDemo https://github.com/GMOD/jbro... was committed by Ian Holmes 06:10 PM
Commit [870176e8396f522c085ac65236b6e633789ad0bb]
Makefile.rotunda https://github.com/G... was committed by Ian Holmes 02:45 PM
Commit [360fecb6a53ff8f06a7fcf31db53444975a1044b]
Rotunda data files https://github.com... was committed by Ian Holmes 02:44 PM
Commit [72d85f669df4d4b27485734a4dc449626dd90bde]
rotunda src files https://github.com/... was committed by Ian Holmes 02:13 PM
Commit [0345a416aefb0541cd2d53ba8a98532b57a71095]
rotunda.css https://github.com/GMOD/j... was committed by Ian Holmes 02:11 PM
Commit [bf4f447c21cb82f50f3f823b9d94b1b85a6d6dd8]
Update jasmine test runner https://gi... was committed by Colin
Friday Jul 15

Commit [112584cbbc319ce3f0d00b953083c480114a2857]
Update jasmine test runner https://gi... was committed by Colin 12:34 PM
Commit [9de6c26bb273fdf63ea5c223095a9def1e115289]
Add deletion handler https://github.c... was committed by Colin
Saturday Jul 09

Commit [6671a842639916ba35cbb038d694cd4e12ad4459]
Update softclipping https://github.co... was committed by Colin 10:29 PM
Commit [b125f9f5072a048909045e81c4b42c3ae0752f81]
Add insertion test https://github.com... was committed by Colin 07:01 PM
Commit [a0c9679d0ed8e213906167ca8d0806262064b803]
Cleanup https://github.com/GMOD/jbrow... was committed by Colin 04:29 PM
Commit [9943af6e364bf4e170001de6fb08be7e1c36f5cf]
Add testing for new alignment layout ... was committed by Colin
Friday Jul 08

Commit [7f8ae4847474ff3533cb74bf413ae87b10af97d3]
Unify parsing seqs https://github.com... was committed by Colin 09:29 PM
Commit [1deb016844e3dd41aee7ec9005797d825088589c]
Unify parsing seqs https://github.com... was committed by Colin 09:27 PM
Commit [0f441ad63cd6a83e748cc647294d64a3d6d506b2]
Add softclipping to paired read viewe... was committed by Colin 07:42 PM
Commit [1a49a83bf78825983467cfe664f68a897eb06126]
Add basic matches display https://git... was committed by Colin 01:30 PM
Commit [7c572326627cb08593b87038583eb7edfd339633]
Merge pull request #729 from GMOD/tab... was committed by Eric Y
Thursday Jul 07

Commit [8c8d8384ca8b634880a7753fae07b0b185e60a26]
Update release-notes.txt https://gith... was committed by Colin 02:33 PM
Commit [562669aa39221abc50cfd4f15ec12e04afaaac24]
Merge pull request #783 from GMOD/add... was committed by Colin Diesh 02:31 PM
Commit [e58773fa8a4f7cf91a78ac95f289a733fd0c5ac9]
Add parsing of the B flag from BAM fo... was committed by Colin 12:10 PM
Commit [ca63528bf3e54f3dce84b648435bdb458cc55f49]
Add parsing of the B flag from BAM fo... was committed by Colin 11:58 AM
Commit [42c7d4dcc8e3597b3a4aab735ea2b26edf7c2d4b]
Fix some inconsistencies with missing... was committed by Colin 09:16 AM
Commit [cfe913859a58f5918973b658329efc1391dbd358]
Fix some inconsistencies with missing... was committed by Colin 09:13 AM
Commit [5139af6e9a9735c23db890204456dfda939f3909]
Add tests for BED-3 and BED-6 https:/... was committed by Colin
Wednesday Jul 06

Commit [c3bddc13f82ea92a4b13d5fba9ab735e3aaafb8f]
Add BED test https://github.com/GMOD/... was committed by Colin 09:59 PM
Commit [f16f2606e8b990e15c53e16ea57306dbc8f5eecc]

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